DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep6 and nep-6

DIOPT Version :10

Sequence 1:NP_572831.2 Gene:Nep6 / 32234 FlyBaseID:FBgn0030425 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_494537.1 Gene:nep-6 / 184628 WormBaseID:WBGene00017550 Length:726 Species:Caenorhabditis elegans


Alignment Length:738 Identity:161/738 - (21%)
Similarity:274/738 - (37%) Gaps:220/738 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QLDNDTDAEVKPCENFHQYACGNWYSNTSQRILGAHDMRSKWVANLKLQ---------LIRYLEE 86
            ||.|..|..|.||::|::.|||. ||.        |:     |||.:||         :..:|.:
 Worm    96 QLLNFQDPSVDPCQDFYKAACGK-YSE--------HE-----VANRRLQKKDIIIQRMIKNFLLK 146

  Fly    87 SSSTDSFSANTSVTTSTAQLGTLYRCCLLSGQSIRTYTDALSRSGANFPLLANHTGGSFDWVLAN 151
            :.:::|.|.|.        :..:||.|                            .|..:..:.|
 Worm   147 NETSESKSENV--------MRQVYRTC----------------------------EGLKNEEIFN 175

  Fly   152 AALRTYGAQGLWRLLVKD-----NWQSADQRIFYMLPPKFDLLGRDDE----LNEFLYQ------ 201
            |.::|     .:|.|.||     :|.:||:..              ||    |||.|..      
 Worm   176 ANMKT-----AFRELFKDIQKIGSWPAADKNW--------------DETKLNLNEMLLNIVKLGS 221

  Fly   202 --------RYLKILLLELGLRVRRAALLAEKL--VAFE----KSLQ---KLLPNDAEQTLVLRKP 249
                    |..::..||:...:.|:..::...  :.|:    ..||   .::.:|.|..:.|.:.
 Worm   222 SNFGLFQIRPTEVPFLEVAPDMARSPKVSANFQQIIFDILEKNGLQPDENVIADDVEDYITLEET 286

  Fly   250 QS------------LKDLESQLPRLELKRYFETILEGIDWDSKTLLLVADL-------------D 289
            .|            ...|::|:|.|:|::..|.::.    .::..|||..:             |
 Worm   287 LSQYAYDYNAEKVQFSKLQAQVPSLKLEKIIEEMMN----PNRKKLLVTKVKPRMVAHKHSLFFD 347

  Fly   290 YLQGLQRLLAEHTSDPMVLSTWLLLQLPAYFE-----LRLHDDDKLGNQRNHCLEQLRKLMPGQL 349
            ....|::||  .::....|:.:|:..   |.:     |.:||:  :..:|| |    .||:...|
 Worm   348 EKMNLEKLL--KSTPKRTLANYLIFY---YMDHAMNGLSVHDN--VIKKRN-C----EKLVIEYL 400

  Fly   350 GRLQMQLVLGESYQDVYDTAIQQIAVLFRDLKQQFELVLNETEVFNEDLVTRNLARDKLRAMRLL 414
            .:..:::.:...::......:.::|   .:.|:.|..:|.|:.....|  ::..|..||..|..:
 Worm   401 PKASLRVFVRNHFEKGNLKIVDEMA---EETKKSFIEMLQESTWLGAD--SKKNAILKLEKMGKM 460

  Fly   415 TPRLQDPINGGPGTPQLGGNCDANLLQLSL-----------SQAKLEYRQVFGEPVTSVPADP-- 466
            .        |.|...:..|..|.....|.|           ...:....|.........|.||  
 Worm   461 I--------GYPKEFEKKGALDKMFETLKLLPKDTLYGILKKIGRFHMEQGIEFVALETPMDPVL 517

  Fly   467 --LSVNAYYRLKLNRIELPLGLMATPLIQQQCSKEADTRAKLSAGLGYILAHEMVHAFDLDGLNY 529
              |..||:|..: |.:...:|.|..||......|..:.     |..|.|||||..|.||..|:..
 Worm   518 PVLMTNAFYTDR-NHLSFLVGYMDDPLFDATYPKYVNI-----ALTGNILAHETSHGFDTAGIKR 576

  Fly   530 DATGQLANGQW-SARAIIRFGLRAGCYLGVRYS-----------NATLTVNENIADTEGLRLA-- 580
            |..|::.:  | ....:..:|.:..|.:. :|:           |.|.|:||.:||..|:.:|  
 Worm   577 DENGEVRS--WMKPEDLKEYGKKTQCLVD-QYNEYDDPVFGKNLNGTTTLNEMVADMIGVTVAWK 638

  Fly   581 ----LDTYRHRS--GATNL---RTFFVAFAQNWCGTVASTSGLSQ----HAGHAERVNNVVGNMP 632
                ||:.:.:.  |..|.   :.:|.|.|.::|....:||.:.:    |.....|||.:..|||
 Worm   639 VFEKLDSSKEQKVIGFENENIDKLYFRAAALDFCSLPPTTSLVEELTRVHPTGNFRVNGIFSNMP 703

  Fly   633 EFGDTFECKATSQMNPVNKCHIW 655
            :|...|.|...|.|||..:|.|:
 Worm   704 QFATAFNCPEGSPMNPKTRCSIF 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep6NP_572831.2 M13 40..653 CDD:341056 155/725 (21%)
nep-6NP_494537.1 M13 105..724 CDD:341056 155/725 (21%)

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