DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep6 and nep-4

DIOPT Version :10

Sequence 1:NP_572831.2 Gene:Nep6 / 32234 FlyBaseID:FBgn0030425 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_509156.2 Gene:nep-4 / 183746 WormBaseID:WBGene00016896 Length:437 Species:Caenorhabditis elegans


Alignment Length:173 Identity:46/173 - (26%)
Similarity:70/173 - (40%) Gaps:36/173 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   510 LGYI---LAHEMVHAF-----DLDGLNYDATGQLANGQWSARAIIRFGLRAGC---YLGV---RY 560
            |||.   :.||:.|.|     :.|||.|.:.        .|...::......|   |.|.   ..
 Worm   265 LGYTGTRVGHEIGHTFIEHSINPDGLPYFSK--------PAEDCVQNQYLKTCNEYYEGEVPDAC 321

  Fly   561 SNATLTVNENIADTEGLRLAL--------DTYRHRSGA---TNLRTFFVAFAQNWCGTVASTSGL 614
            :.:..|.::|.||..||:||.        |..|.::..   ||.:..|.:||..:|....|.:..
 Worm   322 NTSDYTFDDNGADVFGLQLAYAILERDLSDQLREQADGLKITNEQLLFYSFAYRFCRGSKSNTTD 386

  Fly   615 SQHAGHAERVNNVVGNMPEFGDTFECKATSQM--NPVNKCHIW 655
            ..|:.|..|: |.|..||.|...|.|.:.|:|  :...:|.|:
 Worm   387 GSHSHHNVRI-NAVAQMPGFQQAFNCASDSRMMKSATKQCVIY 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep6NP_572831.2 M13 40..653 CDD:341056 44/169 (26%)
nep-4NP_509156.2 GluZincin 250..425 CDD:472708 44/168 (26%)

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