DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep6 and nep-21

DIOPT Version :10

Sequence 1:NP_572831.2 Gene:Nep6 / 32234 FlyBaseID:FBgn0030425 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001360525.1 Gene:nep-21 / 179925 WormBaseID:WBGene00011794 Length:864 Species:Caenorhabditis elegans


Alignment Length:753 Identity:165/753 - (21%)
Similarity:288/753 - (38%) Gaps:202/753 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LDNDTDAEVKPCENFHQYACGNWYSNTSQRILGAHDMRSKWVANLKLQLIRYLEESSSTDSFSAN 96
            |..:.::::.|||:|:::||||:..|.:   |.|:......:::::.:|.:.: :|......|||
 Worm   185 LAENLNSKINPCEDFYEFACGNYGLNKN---LPANKPLRHTISDVQSRLNKQV-KSMLQSPISAN 245

  Fly    97 TSVTTSTAQLGTLYRCCL----LSGQSIRTYTDALSRSGA------------------NFPLLAN 139
            .......|:  ..|:.||    |....:....|...|.|.                  ...|:.|
 Worm   246 EKPWDKVAK--GYYQKCLDEEELESTGVEAMRDIAKRIGGWPTLEGDKWQEWSHSWEEQIALVLN 308

  Fly   140 HTGGSFDWVLANAALRTYGAQGLWRLLVKDNWQSADQRIFYMLPPKFD-------LLGRDDEL-- 195
            .||       .||.        :..:.|..:..::.:.:..:..||:.       |.|.:|.:  
 Worm   309 LTG-------VNAV--------ILEMAVTHDPSNSSRSVIELDQPKWGAGSRYPYLSGANDPMLR 358

  Fly   196 NEFLYQRYLKILLLELGLRVRRAALLAEKLVAFEKSLQKLLPNDAEQTLVLRKPQ------SLKD 254
            |   |...:|:..:.||    ....:|||.:......:..|.|.:...:|.|.|:      .|..
 Worm   359 N---YTTLMKMTAVALG----ADPAIAEKEMNEAMEFELKLVNFSADDMVRRDPERGNNRFELWQ 416

  Fly   255 LESQLPRLELKRYFETIL-EGIDWDSKTLLLVADLDYLQGLQRLLAEHTSDPMVLS---TWLLLQ 315
            |:|..|.:..::|.:|:. |.:.......::|.::||..|:|.:|  .::...||:   :|.|:|
 Worm   417 LKSVFPFINFEKYLKTVFKELVALSPNHTVIVREIDYFVGIQHVL--QSTPKRVLANYISWRLVQ 479

  Fly   316 -------------LP-----AYFELRLHDDDKLG----NQRNHCLEQLRKLMPGQLGRLQMQLVL 358
                         ||     .:::.:.:......    ::...|:         .|..:.|.:.:
 Worm   480 GGPTGDYFSFSPFLPPSAREPFYQFKANQTGMFNSPPPDRWEDCV---------TLSVIMMDMPV 535

  Fly   359 GESYQDVY---DTAIQQIAVLFRDLKQQFELVLNETEVFNEDLVTRNLARDKLRAMRLLTPRLQD 420
            |..:.:.:   :.|::::..|...||.:|...|:..:..:|  :||..|..|...:...:     
 Worm   536 GRLFVENFFEKERAMKKMTELTSYLKNEFIKQLHVLDWMDE--ITRRRAISKANMIEYKS----- 593

  Fly   421 PINGGPGTPQLGGN---CDAN----------LLQLSLSQAKLEYRQVFGEPVTSV--PAD----- 465
                  |.|.:..|   .:.|          ||.|:: :.||..   |.|.:..:  |.|     
 Worm   594 ------GFPMVLFNDTWMEKNWGMIIKPREYLLHLTI-RVKLVR---FTEELLRLDQPLDRSMWF 648

  Fly   466 --PLSVNAYYRLKLNRIELPLGLMATPLIQQQCSKEADTRAKLSAG---------LGYILAHEMV 519
              |..|:|||....|.:..|.|:|..|.              |:.|         :|.::.||:.
 Worm   649 QSPAQVDAYYAPNNNEMIFPAGIMQFPF--------------LTLGVPNYITYGMVGAVIGHEVS 699

  Fly   520 HAFDLDGLNYDATGQLANGQWSARAIIRFGLRAGCYLGVR------------YSNATLTVNENIA 572
            ||||..|..||..|.| |..|.|....:|..:..|:  ||            :.|..|::.||||
 Worm   700 HAFDDQGGQYDEMGNL-NDWWDAETEEKFIEKTRCF--VRQYENVHVVEADIHLNGQLSLGENIA 761

  Fly   573 DTEGLRLALDTYR-HRSGATNL--------------RTFFVAFAQNWCGTVASTSGL-----SQH 617
            |..|::.|.:.|: .:|..|.:              :.||:|:|.|||..|.....:     ..|
 Worm   762 DNGGVKTAFNAYKAWKSNTTGISEPALPGFQNFTSQQMFFLAYANNWCSLVRPKHYIQIILTDVH 826

  Fly   618 AGHAERVNNVVGNMPEFGDTFECKATSQMNPVNKCHIW 655
            |....|....:.|.|||...|:|...|.|||..||.:|
 Worm   827 APSKYRAMIPLQNRPEFAKAFQCPIGSPMNPERKCQVW 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep6NP_572831.2 M13 40..653 CDD:341056 162/741 (22%)
nep-21NP_001360525.1 M13 193..862 CDD:341056 162/741 (22%)

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