DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep6 and nep-1

DIOPT Version :9

Sequence 1:NP_001245645.1 Gene:Nep6 / 32234 FlyBaseID:FBgn0030425 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_496490.2 Gene:nep-1 / 174787 WormBaseID:WBGene00013926 Length:754 Species:Caenorhabditis elegans


Alignment Length:773 Identity:179/773 - (23%)
Similarity:293/773 - (37%) Gaps:231/773 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QDCQQQLDNDTDAEVKPCENFHQYACGNW---------------YSNTSQRILGAHDMRSKWVAN 75
            |:..:.|....:..:.||::|.:|||..|               ::.|.:::|.  :||      
 Worm    70 QEASRLLQKSLNLSLDPCDDFFEYACRAWVDSHPIPDDLTSYSQFTATREKVLA--EMR------ 126

  Fly    76 LKLQLIRYLEESSSTDSFSANTSVTT--STAQLGTLYRCCLLSGQSIRTYTDALSRSGANFPLLA 138
             ||              :..|||:.|  |.|.:..:|..|:        .|:..:..||. .||.
 Worm   127 -KL--------------YEDNTSIPTSKSIALIKQIYNTCM--------DTEKHNAVGAR-DLLE 167

  Fly   139 NHTGGSFDWVLANAALRTYGAQGLWRLLVKDNW---------------QSADQRIFYMLPP---- 184
            .              ::||   |.|.::..:.|               ||.|..:|:...|    
 Worm   168 K--------------IKTY---GYWPMVHNEKWRESTFDLTKLLSNTIQSRDVSVFFDFGPAEDS 215

  Fly   185 --------KFDL----LG---RDDELNEFLYQRYLK-----------ILLLELGLRVRRAALLA- 222
                    .||.    ||   ||..|:|..|::.:|           ....:.|:.|..:.:.: 
 Worm   216 RNVSRRLLSFDQGSLGLGYSTRDYYLDEKKYEKQMKAYRKYTIGKVRYYTEDAGMAVNESKIESD 280

  Fly   223 -EKLVAFEKSLQKLLPNDAEQTLVLRKPQSLKDLESQLPRLELKRYFETILEGIDWDSKTL---- 282
             ::::||||...::|..: |......|..:::..:      :||.|...    |||...||    
 Worm   281 VDEIIAFEKEWAQILVAE-EDRRNYTKLYNVRRFD------DLKEYMSI----IDWKKLTLSTTP 334

  Fly   283 ------------LLVADLDYLQGLQRLLAEHTSDPMVLSTWLLLQLPAYFELRLHDDDKLGNQRN 335
                        ::::|::|||.:..||  ..:||.:::.::||:....:      ..::|.:  
 Worm   335 FLVHSYLKTNPSIIISDVEYLQKMNTLL--QNTDPRIVTNYILLRWAGSW------SQEIGKK-- 389

  Fly   336 HCLEQLRKLMPGQL-GRLQMQ---------------LVLGESYQDVY------DTAIQQIAVLFR 378
              .|.|::....|: ||.|.|               ...|..|...|      :|.:..|.    
 Worm   390 --YEDLQQEFAFQMYGRKQRQPRWKDCVSSAGGKLSYASGSMYVRKYFDANAKNTTLDMIT---- 448

  Fly   379 DLKQQFELVLNETEVFNEDLVTRNLARDKLRAMR---------LLTPRLQDPINGGPGTPQLGGN 434
            ||::.|..:::..:..  |..|:..|.:|...|.         |...:|.|...|..|.|:   :
 Worm   449 DLQEAFRNMMHANDWM--DAETKKYALEKADQMLKQIGYPDFILNDEKLDDWYKGLEGAPE---D 508

  Fly   435 CDANLLQLSLS-QAKLEYRQVFGEPVTSVP--ADPLSVNAYYRLKLNRIELPLGLMATPLIQQQC 496
            ..:.|::.|:. :....||::. |||....  :....|||:|....|.|..|.|::..|....:.
 Worm   509 SFSQLVEKSIQWRNNFYYRRLL-EPVNRFEFISSAAVVNAFYSPTRNAIAFPAGILQQPFFDARF 572

  Fly   497 SKEADTRAKLSAGLGYILAHEMVHAFDLDGLNYDATGQLANGQWSARAIIRFGLRAGC----YLG 557
            .|     |....|:|.::.||:.|.||..|..:|..|.|.: .|......:|..|..|    |..
 Worm   573 PK-----ALNYGGIGAVIGHEITHGFDDTGRQFDNVGNLRD-WWDNTTSSKFNERTQCIIEQYAD 631

  Fly   558 VRYS------NATLTVNENIADTEGLRLALDTYR---HRSGA-----------TNLRTFFVAFAQ 602
            |:..      |..||..|||||..|::.|...|:   .:.|.           ||.:.|||.:||
 Worm   632 VKLRGTDLRINGKLTQGENIADNGGIKQAFKAYKSYLEKHGGQEARLPQFESLTNEQLFFVGYAQ 696

  Fly   603 NWCGT-VASTSGL----SQHAGHAERVNNVVGNMPEFGDTFECKATSQMNPVNKCHIW 655
            .|||. ...|..|    ..|:....|||.|:.|.|||.:.|:|.|.|.|||..:|.:|
 Worm   697 VWCGAKTPETKTLLLLTDPHSPETARVNTVLTNQPEFAEAFKCPAGSPMNPTKRCVVW 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep6NP_001245645.1 PepO 35..655 CDD:226118 176/762 (23%)
M13 40..653 CDD:189000 175/755 (23%)
nep-1NP_496490.2 PepO 80..754 CDD:226118 176/761 (23%)
M13 85..751 CDD:189000 175/753 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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