DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep6 and Mme

DIOPT Version :10

Sequence 1:NP_572831.2 Gene:Nep6 / 32234 FlyBaseID:FBgn0030425 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_032630.2 Gene:Mme / 17380 MGIID:97004 Length:750 Species:Mus musculus


Alignment Length:775 Identity:172/775 - (22%)
Similarity:301/775 - (38%) Gaps:179/775 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSSITRLVVILGVMLLKLAAAQD---CQQ--------QLDNDTDAEVKPCENFHQYACGNWYS-- 56
            ||.:..|:.|:.|.::.|.|..|   |:.        :|..:.||.|:||.:|.:||||.|..  
Mouse    31 LSVLVLLLTIIAVTMIALYATYDDGICKSSDCIKSAARLIQNMDASVEPCTDFFKYACGGWLKRN 95

  Fly    57 ---NTSQRILGAHDMRSKWVANLKLQLIRYLEESSSTDSFSANTSVTTSTAQLGTLYRCCLLSGQ 118
               .||.|......:|.:    |::.|...|:|..:.|        ..:..:..||||.|:    
Mouse    96 VIPETSSRYSNFDILRDE----LEVILKDVLQEPKTED--------IVAVQKAKTLYRSCI---- 144

  Fly   119 SIRTYTDALSRSGANFPLLA---------------NHTGGSFDWVLANAALR---TYGAQGLWRL 165
                ...|:...|.. |||.               :.|.|: .|....:..:   .||.:.|...
Mouse   145 ----NESAIDSRGGQ-PLLKLLPDIYGWPVASDNWDQTYGT-SWTAEKSIAQLNSKYGKKVLINF 203

  Fly   166 LVKDNWQSADQRIFYMLPPKFDLLGRDDELNEFLYQR----YLKILLLELGL-RVRRAALLAEKL 225
            .|..:.:::.|.|.:...|:..|..||......:|:.    |:..::....| |..::..:.|..
Mouse   204 FVGTDDKNSTQHIIHFDQPRLGLPSRDYYECTGIYKEACTAYVDFMISVARLIRQEQSLPIDENQ 268

  Fly   226 VAFEKSLQKLLPNDAEQTLVLRKPQSLKD---LESQLPRLELKRYFETILEG--IDWDSKTLLLV 285
            ::.|  :.|::..:.|......||:...|   |.:::...:|:..|...:.|  ..|.:.|..::
Mouse   269 LSLE--MNKVMELEKEIANATTKPEDRNDPMLLYNKMTLAKLQNNFSLEVNGKSFSWSNFTNEIM 331

  Fly   286 ADL---------------DYLQGLQRLLAEHT-SDPMVLSTW-LLLQLPA-----YFELR----- 323
            :.:               :||..|:.:|.::: .|...|.:| .::.|.:     |.|.|     
Mouse   332 STVNINIQNEEEVVVYAPEYLTKLKPILTKYSPRDLQNLMSWRFIMDLVSSLSRNYKESRNAFRK 396

  Fly   324 -LHDDDKLGNQRNHCLEQLRKLMPGQLGRLQMQLVLGESYQDVYDTAIQQIAVLF---------- 377
             |:...........|...:...|...:|||.::.......:.|.:..|.||..:|          
Mouse   397 ALYGTTSETATWRRCANYVNGNMENAVGRLYVEAAFAGESKHVVEDLIAQIREVFIQTLDDLTWM 461

  Fly   378 -RDLKQQFE---LVLNETEVFNEDLVTRNLARDKLRAMRLLTPRLQDPINGGPGTPQLGGNCDAN 438
             .:.|::.|   |.:.|...:.:|:::.   .:||....|.....:|             ....|
Mouse   462 DAETKKKAEEKALAIKERIGYPDDIISN---ENKLNNEYLELNYRED-------------EYFEN 510

  Fly   439 LLQ-LSLSQAK--LEYRQ-------VFGEPVTSVPADPLSVNAYYRLKLNRIELPLGLMATPLIQ 493
            ::| |..||:|  .:.|:       :.|..|         |||:|....|:|..|.|::..|...
Mouse   511 IIQNLKFSQSKQLKKLREKVDKDEWISGAAV---------VNAFYSSGRNQIVFPAGILQPPFFS 566

  Fly   494 QQCSKEADTRAKLSAGLGYILAHEMVHAFDLDGLNYDATGQLANGQWSARAIIRFGLRAGCYL-- 556
            .|.|...:     ..|:|.::.||:.|.||.:|.|::..|.|.: .|:.::...|..::.|.:  
Mouse   567 AQQSNSLN-----YGGIGMVIGHEITHGFDDNGRNFNKDGDLVD-WWTQQSANNFKDQSQCMVYQ 625

  Fly   557 ---------GVRYSNATLTVNENIADTEGLRLALDTYRH---RSGATNL---------RTFFVAF 600
                     |.::.|...|:.|||||..|:..|...|::   ::|...|         :.||:.|
Mouse   626 YGNFSWDLAGGQHLNGINTLGENIADNGGIGQAYRAYQNYVKKNGEEKLLPGLDLNHKQLFFLNF 690

  Fly   601 AQNWCGTVASTSGLSQ-----HAGHAERVNNVVGNMPEFGDTFECKATSQMNPVNKCHIW 655
            ||.||||......::.     |:....|:...:.|..||.|.|.|:..|.|||..||.:|
Mouse   691 AQVWCGTYRPEYAVNSIKTDVHSPGNFRIIGTLQNSAEFADAFHCRKNSYMNPERKCRVW 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep6NP_572831.2 M13 40..653 CDD:341056 158/725 (22%)
MmeNP_032630.2 Stop-transfer sequence. /evidence=ECO:0000255 16..23
M13 77..748 CDD:341056 158/725 (22%)
Blue background indicates that the domain is not in the aligned region.

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