DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep6 and nep-10

DIOPT Version :9

Sequence 1:NP_001245645.1 Gene:Nep6 / 32234 FlyBaseID:FBgn0030425 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_494532.2 Gene:nep-10 / 173684 WormBaseID:WBGene00017555 Length:711 Species:Caenorhabditis elegans


Alignment Length:706 Identity:141/706 - (19%)
Similarity:269/706 - (38%) Gaps:163/706 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QLDNDTDAEVKPCENFHQYACGNWYSNTSQRILGAHDMRSKWVANLKLQLIR-YLEESSSTDSFS 94
            :|.|..|..|.||::|:|:.||.:|.:::   :|...|.:|  .:...:||| :|.::.::.|.|
 Worm    88 ELHNYKDPSVDPCQDFYQHFCGKFYEHSA---IGQGRMATK--RSTLSKLIREFLLKNKTSTSKS 147

  Fly    95 ANT--SVTTSTAQLGTLYRCCLLSGQSIRTYTDALSRSGANFPLLANHTGGS------------- 144
            .||  .|.....:|..:.....:..|::......:.:.|| :|:|.....||             
 Worm   148 ENTMKQVYAKCRELQKISDLNSIPPQALLDIFSDIKKIGA-WPVLDKDWDGSKFNLNEMLRQLVN 211

  Fly   145 ----------FD-----WVLANAALRTYGAQGLW--------RLLVKDNWQSADQRIFYMLPPKF 186
                      ||     :||....|:    ||:.        :::::.|....||          
 Worm   212 LGETHLGFFHFDFIARPYVLIKPPLK----QGVQKSVLEKVVKMILEANEIKMDQ---------- 262

  Fly   187 DLLGRDDELNEFLYQRYLKILLLELGLRVRRAALLAEKLVAFEKSLQKLLPNDAEQTLVLRKPQS 251
               |..::|:|:          .||..|::     .:||....:|:..|||:       :|:...
 Worm   263 ---GFSEDLDEY----------FELSNRIK-----IDKLPRTSRSIVGLLPD-------VRRINF 302

  Fly   252 LKDLESQLPRLELKRYFETILEG-IDWDSKTLLLVADLDYLQGLQRLLAEHTSDPMVLSTWLLLQ 315
            ...:...:||.::.|:..|:.:. :.:.....:...:.::|..:.|     ::....|:.:|:..
 Worm   303 RGLILEMMPRSKMNRFLGTLFQKVVTYHHPLFVRDNETNHLDTIIR-----STSNRALANYLIFN 362

  Fly   316 LPAYFELRLHDDDK-----LGNQRNHCLEQLRKLMPGQLGRLQMQLVLGESYQDVYDTA-IQQIA 374
            .       :|...|     |.:.|..|    .|::..:|.|..:::.:    ::..|.. .:::|
 Worm   363 F-------IHSSIKFLTFGLKSDRERC----EKIVVQELPRPSLRVFM----RNCVDKGNREEVA 412

  Fly   375 VLFRDLKQQFELVLNETEVFNEDLVTRNLARDKLRAMRLLTPRLQDPINGGPGT-----PQLGGN 434
            .|...:|:....::.|::.|...:..|.|.:.:.....:..|...||    |||     ..|..:
 Worm   413 KLTETVKENVLEMIRESDSFTPSVKKRVLKKVEAIGAIIGYPDHFDP----PGTLDKEYENLTLD 473

  Fly   435 CDANLLQLS--LSQAKLEYRQVF--GEPVTSVPADPLSVNAYYRLKLNRIELPLGLMATPLIQQQ 495
            ...:..::|  |.|.:|:::..|  |:...|.....|.|||:|..|.|.:.:....:..|.....
 Worm   474 ASDSYYKMSQKLHQLRLQHQMEFLAGQTPLSPSDQVLEVNAHYDSKDNALTVLAPFLDDPFFDST 538

  Fly   496 CSKEADTRAKLSAGLGYILAHEMVHAFDLDGLNYDATGQLANGQWSARAIIRFGLRAGCYLGV-- 558
            ..:..:.     ...|:::.||..|:.|...|..|       |.:....:..:|.||.|.:..  
 Worm   539 YPEYVNL-----IFTGFLIGHEFGHSIDPKILRRD-------GWYKTEDMTEYGKRAQCLIDQYD 591

  Fly   559 --------RYSNATLTVNENIADTEGLRLALDTYRHRSGA----------TNL-RTFFVAFAQNW 604
                    :..|.|..:.|.:.|..|..:....::....:          .|| :.:|...:..:
 Worm   592 NYDDPDHGKQMNGTYCIGEIVGDWVGRDVTWRAFKKMDLSKMQKLIGFEDKNLDQLYFRIQSLFF 656

  Fly   605 CGTVASTSGLSQ-----HAGHAERVNNVVGNMPEFGDTFECKATSQMNPVNKCHIW 655
            ||. .|...|.|     |.....|||.:..|||:|...|.|...|.|||..||.::
 Worm   657 CGP-RSMKSLEQLLSDPHPTEVFRVNGIYSNMPQFAKAFNCPIGSPMNPEKKCKMF 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep6NP_001245645.1 PepO 35..655 CDD:226118 139/700 (20%)
M13 40..653 CDD:189000 137/693 (20%)
nep-10NP_494532.2 M13 97..709 CDD:189000 137/693 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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