DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep6 and mmel1

DIOPT Version :9

Sequence 1:NP_001245645.1 Gene:Nep6 / 32234 FlyBaseID:FBgn0030425 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_012821551.1 Gene:mmel1 / 100145721 XenbaseID:XB-GENE-991673 Length:765 Species:Xenopus tropicalis


Alignment Length:778 Identity:164/778 - (21%)
Similarity:288/778 - (37%) Gaps:240/778 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 AAAQDCQQQLDNDTDAEVKPCENFHQYACGNWYS-----NTSQRILGAHDMRSKWVANLKLQLIR 82
            |||:..|     :.|..::||.:|:|||||.|.:     .||.|......:|.:....||..|  
 Frog    83 AAARIIQ-----NMDPTIEPCTDFYQYACGGWLNKHVIPETSSRYSIFDILRDEMEIILKGLL-- 140

  Fly    83 YLEESSSTDSFSANTSVTTSTAQLGTLYRCCLLSGQSIRTYTDALSRSGANFPLLANHTGGSFDW 147
            .:.:....|:|.          :...||:.|:  .:|:....|:|       |||...|... :|
 Frog   141 EMPDQEDRDAFK----------KAKILYKSCM--NESLIEQRDSL-------PLLELLTTVG-EW 185

  Fly   148 VLANAALRTYGAQGLWRLLVKDNW---------------------------QSADQRIFYMLPPK 185
            .:|:..         |....:.||                           :.:.:.|.|:..|.
 Frog   186 PVASTD---------WNGTKESNWSLEEKLSLLNYKFNKRVLVDIFVWNDDRESSKHIIYIDQPS 241

  Fly   186 FDLLGRDDELNEFLYQR----YLKILLLELGLRVRRAALLAEKLVAFEKSLQKLLPNDAEQTLVL 246
            ..:..||...|:..|||    ||:.:            :...::|..:::|.:      :.:||.
 Frog   242 LGMPSRDYYFNKGNYQRIREAYLQFM------------ITIARMVREDRNLTR------DDSLVQ 288

  Fly   247 RKPQSLKDLESQLPR--------------------LELKRYFETILEGIDWDS------------ 279
            .:...:.|||:.:.|                    ||.::.|  .|:..:|.|            
 Frog   289 EEMTRVMDLETDIARATAPSEERNDVTLLYNKMTLLEFQQKF--ALDDFNWTSFIQGVMSSVNIQ 351

  Fly   280 ---KTLLLVADLDYLQGLQRLLAEHTSDPMV-LSTWLLLQLPAYFELRLHDDDKLGNQR------ 334
               :..::|....||..|:.:|:.:::..:. ...|.::........|.:.|.:...::      
 Frog   352 LQAEEEVVVYGAPYLHQLKNILSNYSASTLQNYVVWRMVIDRVSSLSRRYKDARASYRKALYGTT 416

  Fly   335 ------NHCLEQLRKLMPGQLGRLQM-QLVLGESYQDVYDTAIQQIAVLFRDLKQQFELVLNETE 392
                  ..|:..:...|...:|.:.: :...|||.:.:.|        |...:::.|...|:|.:
 Frog   417 LEEARWRECVSYVNSNMENAVGAMYVKETFAGESKRMISD--------LINKVREAFIETLDELQ 473

  Fly   393 VFNEDLVTRNLARDKLRAMRLLTPRLQDPINGGPGTPQ--LGGNCD-----------------AN 438
            ..:|      .::||.|...|   .:::.|    |.|.  |....|                 .|
 Frog   474 WMDE------TSKDKAREKAL---SIKEQI----GYPDYILEDQNDKLDQETAALNFSEYQYFEN 525

  Fly   439 LLQLSLSQAKLEYRQVFGEPVT-------SVPADPLSVNAYYRLKLNRIELPLGLMATPLIQQQC 496
            :|::..|.|:...::: .|||.       :..||     |:|....|:|..|.|::..|...:. 
 Frog   526 ILEILNSGAQKSLKKL-REPVDQDAWIIGAAVAD-----AFYSPNRNQIVFPAGILQPPFFNKH- 583

  Fly   497 SKEADTRAKLSAGLGYILAHEMVHAFDLDGLNYDATGQLANGQWSARAIIRFGLRAGCYLGVRYS 561
                ..:|....|:|.::.||:.|.||.:|.|:|..|.:.: .||..:.:.|..::.|.: .:|.
 Frog   584 ----QPQALNFGGIGMVIGHEITHGFDDNGRNFDKDGNMFD-WWSNFSAMHFKDQSRCMV-YQYG 642

  Fly   562 NAT------------LTVNENIADTEGLRLALDTY-----RHRS-------GATNLRTFFVAFAQ 602
            |.|            :|:.|||||..|:|.|...|     ||..       ..|..:.||:.|||
 Frog   643 NYTWELAGGQNVSGIITLGENIADNGGVRQAYKAYLKWVERHGKEPKLPGLDLTYKQLFFLNFAQ 707

  Fly   603 NWCGTVASTSGLSQHAGHA----------ERVNNVVGNMPEFGDTFECKATSQMNPVNKCHIW 655
            .|||     |...::|.|:          .||...:.|...|.:.|.||..::|:||.||.:|
 Frog   708 VWCG-----SYRPEYARHSIKTDVHSPFKYRVMGSLQNFEAFAEEFNCKKGTKMHPVEKCRVW 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep6NP_001245645.1 PepO 35..655 CDD:226118 159/764 (21%)
M13 40..653 CDD:189000 157/757 (21%)
mmel1XP_012821551.1 M13 95..763 CDD:341056 157/757 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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