DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and Pde1a

DIOPT Version :10

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_063140682.1 Gene:Pde1a / 81529 RGDID:68329 Length:565 Species:Rattus norvegicus


Alignment Length:543 Identity:142/543 - (26%)
Similarity:223/543 - (41%) Gaps:137/543 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   534 SNVDGDATATAATALSSTVGGGIGGIGGSIKMRASATDIETNALNGARDAIVASNNGNNGNNGNN 598
            :::||.       .||.|..|.:    |:|.|.::.|||| ...|.....::             
  Rat     4 ASLDGH-------TLSITTCGAL----GNIIMGSTDTDIE-ELENATYKYLI------------- 43

  Fly   599 GNNEYSILQLNNTIIQCHFNDDDFRALVK----------DLKRKVEY------------TERM-- 639
            |.....:.|....|::|         |||          |||:.:||            |.|:  
  Rat    44 GEQTEKMWQRLKGILRC---------LVKQLEKGDVNVVDLKKNIEYAASVLEAVYIDETRRLLD 99

  Fly   640 ------------------NWLCLS-KRPLGPPHRK-SSLPKHQEV-------------KRRFLEI 671
                              :||..: .|.:|...:| ...||.:.:             .|:...:
  Rat   100 TEDELSDIQTDSVPSEVRDWLASTFTRKMGMTKKKPEEKPKFRSIVHAVQAGIFVERMYRKNYHM 164

  Fly   672 CDTTFSEEVRAALRLP---AFDSYEWSDADVIHLMQTMFVEL----GFIEKFSIPVDTL---REW 726
            ...|:...|...|:..   :||.:..::|...|.::.|..||    ..|.:|.|||..|   .|.
  Rat   165 VGLTYPAAVIVTLKEVDKWSFDVFALNEASGEHSLKFMIYELFTRYDLINRFKIPVSCLIAFAEA 229

  Fly   727 LYEVY-KHYNEVPFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNI 790
            |...| ||.|  |:||..|...|.|.::.|.....::..|.:||.|.::.:...||.:|.|..|.
  Rat   230 LEVGYSKHKN--PYHNLVHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAVHDYEHTGTTNN 292

  Fly   791 YQINARTELALRYNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMAR 855
            :.|..|:::|:.|||.|.|||||.|.|:||::..|.||..|.|:|.:.::|..:|..:|||||:.
  Rat   293 FHIQTRSDVAILYNDRSVLENHHVSAAYRLMQEEEMNILVNLSKDDWRDLRNLVIEMVLATDMSG 357

  Fly   856 HNEILTQFMEITPIFDYSNRAHIN--------LLCMILIKVADISNEARPMDVAEPWLDRLLQEF 912
            |      |.:|..|     |:.:.        ....:::..||||:.|:...:...|...|::||
  Rat   358 H------FQQIKNI-----RSSLQQPEGIDRAKTMSLILHAADISHPAKTWKLHYRWTMALMEEF 411

  Fly   913 FAQSAAEKSEGLPVTPFMDPDKVSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEY 977
            |.|...|...|||.:|..|........||:.||..::.|.|    .|:.:.||.|:||       
  Rat   412 FLQGDKEAELGLPFSPLCDRKSTMVAQSQIGFIDFIVEPTF----SLLTDSTEKIVIP------- 465

  Fly   978 YRRLNDAQTKTRKSVADSNTSAT 1000
               |.:..:|...|...:::|:|
  Rat   466 ---LIEEASKPESSNYGASSSST 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:459723 75/235 (32%)
Pde1aXP_063140682.1 None

Return to query results.
Submit another query.