DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde9 and pde4a

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_009298019.1 Gene:pde4a / 572061 ZFINID:ZDB-GENE-131125-7 Length:777 Species:Danio rerio


Alignment Length:685 Identity:156/685 - (22%)
Similarity:255/685 - (37%) Gaps:190/685 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 HRSNLTVIRHHHHQQHQQHQQQQRITNNNNNNNNCNSIQNNNNM---SNPAATAAATATPSVEQP 446
            ||......||||.|                       |:.:|.|   ..|....:..:.||    
Zfish    44 HRGYSDTDRHHHRQ-----------------------IERSNAMDTSDRPGLKKSRMSWPS---- 81

  Fly   447 ATSGTTNIHLQ---PTSLPDGSDNPRRRRASDCSAVQAAL-------QNQLHCITLKNNNCGKAM 501
            :..|||:..:.   .....||.:.|...|:...|.....|       |:|               
Zfish    82 SFHGTTSASMSNCAGNKRYDGENGPSPGRSPMDSQASPGLVLHPSFPQSQ--------------- 131

  Fly   502 PFHRGSCGAAGEHLLAANSIANRATIILSKSCS-NVDGDATATAATALSSTVGGGIGGIGGSIKM 565
              .|.|      .|..::|..:.:...:|::.| |.:|.|.....|..:..: ..:..:..:..:
Zfish   132 --RRES------FLYRSDSDYDMSPKTMSRNSSINSEGHAEDLIVTPFAQVL-ASLRTVRSNFTI 187

  Fly   566 RASATDIETNALNGARDAIVASNNGNNGNNGNNGNNEYSILQLNNTIIQCHFNDDDFRALVKDLK 630
            .|:.|...|.    .|..:.:                      ..|:.....:|:.::.|.:   
Zfish   188 LANVTTPTTT----MRSPVTS----------------------QPTVPPATLSDETYQQLAR--- 223

  Fly   631 RKVEYTERMNWLCLSKRPLGPPHRKSSLPKHQEVKR-----------------RFLEICDTTF-- 676
               |..|.::| ||.:......||..|.....:.||                 :..|...|||  
Zfish   224 ---ETLEELDW-CLDQLETIQTHRSVSEMASNKFKRMLNRELSHLSEMSRSGNQVSEYISTTFLD 284

  Fly   677 -SEEVR----------------------------AALRLPAF---------------DSYEWSDA 697
             ..||.                            .:..||.|               |..:|. .
Zfish   285 KQNEVEIPSPTLREREKPMSHISGVKKLTHSSSLTSAALPRFGVKTEQEDALARELNDLNKWG-L 348

  Fly   698 DVIH------------LMQTMFVELGFIEKFSIPVDTLREWLYEVYKHYN-EVPFHNFRHCFCVA 749
            ::.|            :|..:|.|...::.|.|||||...::..:..||: .|.:||..|...|.
Zfish   349 NIFHVAEFSNNRPLSCIMFAIFQERDLLKTFRIPVDTFITYVMTLEDHYHANVAYHNSLHAADVT 413

  Fly   750 QMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALRYNDISPLENHHC 814
            |..:.:.....|.:...|||.|..|.:...||:||||.:|.:.||..:||||.|||.|.|||||.
Zfish   414 QSTHVLLSTPALDAVFSDLEILAALFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHL 478

  Fly   815 SIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFME-----------ITP 868
            ::.|:||....|:||:|.::....::|:.:|..:|||||::|..:|.....           :..
Zfish   479 AVGFKLLHEENCDIFQNLTKRQRQSLRKLVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLM 543

  Fly   869 IFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVTPFMDPD 933
            :..|::|..:   ...::..||:||..:|:.|...|.:|:::|||.|...|:..|:.::|..|..
Zfish   544 LDHYNDRIQV---LRNMVHCADLSNPTKPLAVYRQWTERIMEEFFQQGDKERERGMEISPMCDKH 605

  Fly   934 KVSKPGSQVRFIGLVLLPLFEALGELV-PELTELI 967
            ..|...|||.||..::.||:|..|:|| |:..|::
Zfish   606 TASVEKSQVGFIDYIVHPLWETWGDLVHPDAQEIL 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 81/239 (34%)
pde4aXP_009298019.1 PDEase_I 403..644 CDD:278654 81/241 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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