DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde9 and pde4cb

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_021335380.1 Gene:pde4cb / 571344 ZFINID:ZDB-GENE-030131-4075 Length:721 Species:Danio rerio


Alignment Length:698 Identity:171/698 - (24%)
Similarity:297/698 - (42%) Gaps:114/698 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 RHHHHQQHQQHQQQQRITNNNNNNNNCNSIQNNNNMSNPAATAAATATPS-------VEQPATSG 450
            :|...|.....:.:||..::......||.....|   .|.......:.||       ||...:.|
Zfish    18 KHLWRQPRTHIRIKQRYHSDTERYLCCNKATEKN---RPGLKKPRMSWPSSFHKRFDVENGLSMG 79

  Fly   451 TTNIHLQPTSLPDGSDNPRRRRA----SDCS--------AVQAALQNQLHCITLKNNNCGKAM-- 501
            .:::...|:|......|.:||.:    ||..        :..::..::||         |:.|  
Zfish    80 RSSLDPSPSSGLVLQANSQRRESFLYRSDSDFDLSPKTMSRNSSTASELH---------GEDMIV 135

  Fly   502 -PFH---------RGSCGAAGEHLLAANSIANRATIILSKSCSNVDGDATATAATALSSTVGGGI 556
             ||.         ||:. ||..|:...::.....|...|...:|:..:|...........:...:
Zfish   136 TPFAQVLASLRTVRGNV-AALTHMQDRSNKRPSGTNPQSACKTNLSDEAYQKLTVETLEELDWCL 199

  Fly   557 GGIGGSIKMRASATDIETN----ALNGARDAIVASNNGNNGNNGNNGNNEYSILQLNNTIIQCHF 617
            ..: .:::.|.|.:::.:|    .||  |:....|....:||.    .:|:    :.:||:|..:
Zfish   200 DQL-ETLQTRHSVSEMASNKFKRMLN--RELTQLSETSRSGNQ----VSEF----IASTILQKQY 253

  Fly   618 NDDDFRALVKDLKRKVEYTERMNWLCLSKRPLGPPHRKSSLPK------HQEVKRRFLEICDTTF 676
            :.:...|..|:.|::...::......||..|..||   :.:|:      |:.:..:.||..|   
Zfish   254 DVELLSAACKEEKKRRPMSQISGVRKLSPSPSLPP---TCIPRFGVNTQHESLLAKELEDLD--- 312

  Fly   677 SEEVRAALRLPAFDSYEWS-DADVIHLMQTMFVELGFIEKFSIPVDTLREWLYEVYKHYN-EVPF 739
                  ...:..|...|:| :..:..:|.|:|.|...::.|.||.||...:|..:..||: :|.:
Zfish   313 ------RWGIDIFKIAEYSGNRPLTVMMYTIFQERDLLKTFKIPSDTFLTFLMTLEDHYHADVAY 371

  Fly   740 HNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALRYN 804
            ||..|...|.|..:.:.....|.....|||.:..|.:...||:||||..|.:.||..:||||.||
Zfish   372 HNNIHAADVVQSTHVLLSTPALEDVFTDLEIMAALFASAIHDVDHPGVTNQFLINTNSELALMYN 436

  Fly   805 DISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEITP- 868
            |.|.|||||.::.|:||:...|:||.|.|:....::|:..|..:|||||::|...|.....:.. 
Zfish   437 DASVLENHHLAVGFKLLQEENCDIFCNLSKKQRQSLRQMTIDMVLATDMSKHMNFLADLKTMVET 501

  Fly   869 ----------IFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEG 923
                      :.:||:|..:   ...::..||:||..:|:::...|.||::.|||:|...|:.:|
Zfish   502 KKVTSQGVLLLDNYSDRIQV---LQNMVHCADLSNPTKPLELYRKWTDRIMVEFFSQGDRERDKG 563

  Fly   924 LPVTPFMDPDKVSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRLNDAQTKT 988
            :.|:|..|....|...:||.||..::.||:|...:||....:.|:..:....|:|          
Zfish   564 IDVSPMCDKHTASMENTQVGFIDYIIHPLWETWADLVHPDAQDILDTLEDNREWY---------- 618

  Fly   989 RKSVADSNTSATSDSNSGTIDSNAAMVSTPGGASDK----LSLDKGQG 1032
             :|:...:.|.|.:..    ||....|:  |.|.:|    |:|::..|
Zfish   619 -QSMIPRSPSPTPEEQ----DSRPTGVT--GSAGEKFQFELTLEEEDG 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 79/238 (33%)
pde4cbXP_021335380.1 PDEase_I 371..608 CDD:306695 79/239 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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