DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and pde3a

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_009298269.1 Gene:pde3a / 567051 ZFINID:ZDB-GENE-041210-23 Length:1124 Species:Danio rerio


Alignment Length:959 Identity:194/959 - (20%)
Similarity:313/959 - (32%) Gaps:293/959 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 GDTEDNEEEQEHPSEK---PERTDIEEEPPPAI------AVTTTTTAT---------VRRKSS-- 339
            |.|..:.||.....|:   |:|  :.....|.:      ..||||:||         |||..|  
Zfish   346 GHTCSDSEEAPEKGERLAIPKR--LRRSLHPGLLRRISSTWTTTTSATGLPTLEPGPVRRDRSAS 408

  Fly   340 --------SSSTI-------SGTATVSGSVSVSASASQSFCSNNINLLEELLIQFYEEQDHRSNL 389
                    |||.:       |...::|.|.|:|||.:.|  ||..|       ..|.:.....:.
Zfish   409 IKAPHDGPSSSLVNSDSWNNSNMLSISKSRSMSASYAAS--SNTTN-------HIYSKSRRGCSS 464

  Fly   390 TVIRHHHHQQHQQHQQQQRITNNNNNNNNCNSIQNNNNMSNPAATAAATATPSVEQPATSGTTNI 454
            :.|.......|....|...:|:..|.                        |||||.|        
Zfish   465 STISPLASPCHSPPVQSSPLTSPTNK------------------------TPSVELP-------- 497

  Fly   455 HLQPTSLPDGSDNPRRRRASDCSAVQAALQNQLHCITLKNNNCGKAMPFHRGSCGAAGEHLLAAN 519
              .|...|..|.:.....:....:..|||...   .|...::||:.....|.|.|        :.
Zfish   498 --DPELPPPRSPHKALTHSQSAPSSSAALWPP---PTPLCSSCGRPYSKQRHSDG--------ST 549

  Fly   520 SIANRATIILSKSCSNVDGDATATAATALSSTVGGGIGGIGGSIKMRASATDIETNALNGARDAI 584
            ..|.|..          ..|..|..::...||                    .|||         
Zfish   550 EPAERTQ----------QSDEPAMMSSDYDST--------------------YETN--------- 575

  Fly   585 VASNNGNNGNNGNNGNNEYSILQLNNTIIQCHFNDDDFRALVKDLKRKVEYTERMNWLCLSKRPL 649
                                           |.:..||....:|  |:...|       |:...|
Zfish   576 -------------------------------HSDSSDFAQTDED--REARRT-------LTLATL 600

  Fly   650 GPPHRKSSLPKH----QEVKRRFLEICDTTFSEEVRAALRLPAFDSYEWSDAD----VIHLMQTM 706
            .|...|..|...    :.::....:|.:..|          |.|...|.::..    :..:...:
Zfish   601 IPAEEKPILAPEPLLMEGLEPLLCQINNWNF----------PIFSLVEKTNGRCGCILSQMSYRL 655

  Fly   707 FVELGFIEKFSIPVDTLREWLYEVYKHYNEVPFHNFRHCFCVAQMMYAIT--------------- 756
            ||:.|..|.|.|||.....:.:.:...|.::|:||..|...|...::.:|               
Zfish   656 FVDTGLFETFKIPVREFMNYFHALENGYRDIPYHNRIHATDVLHAVWYLTTQPVPGLPTLRTLGS 720

  Fly   757 ----------RQANLLSR---------------LGDLECLILLVSCICHDLDHPGYNNIYQINAR 796
                      |...|:||               :..||.:.|.|:...||.||||..|.:.:...
Zfish   721 SDSDSGLAHGRMKYLMSRTNAVEEEGYGCLSGLIPALELMALYVAAAMHDYDHPGRTNAFLVATS 785

  Fly   797 TELALRYNDISPLENHHCSIAFRL-LEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEIL 860
            ...|:.|||.|.|||||.:.|:.| :..||.|...:.....|...|..:|..|||||:.:|.:.|
Zfish   786 APQAVLYNDRSVLENHHAASAWNLFMSRPEYNFLASLDHMEFKRFRFLVIEAILATDLKKHFDFL 850

  Fly   861 TQFM-----EITPIFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEK 920
            .:|.     :.....|::|.....|:|.:.||:|||:...:..|:...|.:.::.||:.|...|.
Zfish   851 AEFNAKVGDDGCSGIDWTNENDRLLVCQMCIKLADINGPLKCKDLHLQWTEGIVNEFYEQGDEES 915

  Fly   921 SEGLPVTPFMDPDKVSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRLNDAQ 985
            |.|||::||||.........|..||..:       :|.|........::|.|......:..::.:
Zfish   916 SLGLPISPFMDRSAPQLAKLQESFITHI-------VGPLCSSYDSAALMPGRWVHPLPKDGDEVE 973

  Fly   986 TKTRKSVADSNTSATSDSNSGTIDSNAAMVSTPGGAS-----------------DKLSLDKGQGN 1033
            .::.:.  |.:|:...:.::.| .|..:....|....                 .|:..::.|..
Zfish   974 DESEEE--DEDTAEEEEEDAST-SSELSQKPAPKKRRKVFCQISHHLLENHEMWKKVIAEESQSQ 1035

  Fly  1034 SQGSGGGGGGGGGGGAGGGTGSGCGSNAAG---SVSPQMPRSGSGISVKSRRSIPSQKSASRTSV 1095
            ::|.                .|.|.|....   ::..:....||       :..|:......::.
Zfish  1036 TEGE----------------ESTCLSTTPEPILAIDEEEEEPGS-------KEEPTDDQGEGSTE 1077

  Fly  1096 DEPGGMASELHDLPEGSESGDSETATEVDVAEKTSKFKVDTEGSSNRSK 1144
            :|.|.:..:.|:    ::..|.||..|.|  ||.::...|.||..:..:
Zfish  1078 EEEGPVPEDTHE----TQEPDGETVEEAD--EKNTETVEDIEGKQDEDQ 1120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 74/273 (27%)
pde3aXP_009298269.1 PDEase_I 688..947 CDD:278654 73/265 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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