DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde9 and pde4ba

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_021332832.1 Gene:pde4ba / 565706 ZFINID:ZDB-GENE-030131-9570 Length:734 Species:Danio rerio


Alignment Length:742 Identity:161/742 - (21%)
Similarity:274/742 - (36%) Gaps:244/742 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   530 SKSCSNVDGDATATAATALSSTVGGGIGGIGGSIKMR-----ASATDIETNALNGARDAIVASN- 588
            |.|||.:|..|:..:...|.:       ...|..:.|     .|.:|.:.:..:.:|::.|||. 
Zfish   102 SASCSPLDPQASPGSGLVLHT-------NFPGHNQRRESFLYRSDSDYDLSPKSMSRNSSVASEL 159

  Fly   589 NGNN---------GNNGNNGNNEYSILQLNNTIIQCHFN-----------------DDDFRALVK 627
            :|::         ..:..:..|.:::|    |.:||..|                 |:.::.|. 
Zfish   160 HGDDLIVTPFAQVLASLRSVRNNFTVL----TNVQCTSNKRSPVSNQPSITRVCLPDESYQKLA- 219

  Fly   628 DLKRKVEYTERMNWLCLSKRPLGPPHRK------------------------------------- 655
                 ||..|.::| ||.:......:|.                                     
Zfish   220 -----VETMEELDW-CLDQLETIQTYRSVSDMASNKFKRMLNRELTHLSEMSRSGNQVSEFISNT 278

  Fly   656 -----------SSLPKHQEVKRR---FLEI-------------C-----------DTTFSEEVRA 682
                       |..||.:|.|::   ..:|             |           :...|:|:..
Zfish   279 FLDKQNDVEIPSPTPKAREKKKKQQLMTQISGVKKVSHGPSLNCGIARFGVKTDKEDLLSKELED 343

  Fly   683 ALR--LPAFDSYEWS-DADVIHLMQTMFVELGFIEKFSIPVDTLREWLYEVYKHYN-EVPFHNFR 743
            ..|  |..|...|:| :..:..:|..:|.|...::.|.||.||...::..:..||: :|.:||..
Zfish   344 LNRWGLNIFTVSEYSNNRPLTCIMYAIFQERDLLKTFKIPTDTFVTYMMTLEDHYHQDVAYHNSL 408

  Fly   744 HCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALRYNDISP 808
            |...|||..:.:.....|.:...|||.|..:.:...||:||||.:|.:.||..:||||.|||.|.
Zfish   409 HAADVAQSTHILLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESV 473

  Fly   809 LENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEITP----- 868
            |||||.::.|:||:...|:||:|.::....::|..:|..:|||||::|..:|.....:..     
Zfish   474 LENHHLAVGFKLLQEDNCDIFQNLTKKQRTSLRRMVIDMVLATDMSKHMSLLADLKTMVETKKVT 538

  Fly   869 ------IFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVT 927
                  :.:|::|..:   ...::..||:||..:.:::...|.||:::|||.|...|:..|:.::
Zfish   539 SSGVLLLDNYTDRIQV---LRNMVHCADLSNPTKSLELYRQWTDRIMEEFFHQGDRERERGMEIS 600

  Fly   928 PFMDPDKVSKPGSQVRFIGLVLLPLFEALGELV-PELTELIIIPVRIALEYYRRLNDAQTKTRKS 991
            |..|....|...|||.||..::.||:|...:|| |:..:::           ..|.|.:...:..
Zfish   601 PMCDKHTASVEKSQVGFIDYIVHPLWETWADLVHPDAQDIL-----------DTLEDNRNWYQSM 654

  Fly   992 VADSNTSATSDSNSGTIDSNAAMVSTPGGASDKLSLDKGQGNSQGSGGGGGGGGGGGAGGGTGSG 1056
            :..|                   .|.|....||          :|:||..|              
Zfish   655 IPQS-------------------PSPPFYQPDK----------EGNGGSSG-------------- 676

  Fly  1057 CGSNAAGSVSPQMPRSGSGISVKSRRSIPSQKSASRTSVDEPGGMASELHDLPEGSE-----SGD 1116
                                        |.:.....|..:|..          ||:|     .||
Zfish   677 ----------------------------PDKFQFELTLEEEDS----------EGTEKDEQSQGD 703

  Fly  1117 SETATEVDVAEK---TSKFKVDTEGSS 1140
            .|...|.|..|:   |:..::.||.:|
Zfish   704 EEEEAEEDRGEEMESTTHIQIVTEDAS 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 78/239 (33%)
pde4baXP_021332832.1 PDEase_I 404..641 CDD:306695 78/239 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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