DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde9 and pde4bb

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_009296519.1 Gene:pde4bb / 555599 ZFINID:ZDB-GENE-070912-454 Length:707 Species:Danio rerio


Alignment Length:644 Identity:159/644 - (24%)
Similarity:270/644 - (41%) Gaps:169/644 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   426 NNMSNPAATAAAT-----ATP------SVEQPATSGTTNIHLQ--PTS----LPDGSDNPRRRRA 473
            :|:|.|.:....|     .||      .||...:.|.:.:.||  |.|    .|..:.:.:||.:
Zfish    63 DNVSRPTSLGFITPPRIDITPVPPDSLEVENGPSIGCSPLDLQVSPASGLILHPSMASHSQRRES 127

  Fly   474 ------SD-------CSAVQAALQNQLHCITLKNNNCGKAM---PFHRGSCGAAGEHLLAANSIA 522
                  ||       .|...:.:..|||         |:.:   ||        .:.|.:..::.
Zfish   128 FLYRSDSDYDLSPKSTSRNSSLVGEQLH---------GEDLIVTPF--------AQVLASLRTVR 175

  Fly   523 NRATIILSKSC----------------SNVDGDATATAATALSSTVGGGIGGIGGSIKMRASATD 571
            |..:|:.:.||                :|:..::....|......:...:..: .:|:...|.:|
Zfish   176 NNFSILTNVSCPSSKRSPISSHGPVTKANLSDESYQKLALETMEELDWCLDQL-ETIQTYRSVSD 239

  Fly   572 IETN----ALNGARDAIVASNNGNNGNNGNNGNNEYSILQLNNTIIQCHFNDDDFRALVKDLKRK 632
            :.:|    .||  |:....|....:||.    .:|:    ::||.:              |.:.:
Zfish   240 MASNKFKRMLN--RELTHLSEMSRSGNQ----VSEF----ISNTFL--------------DKQNE 280

  Fly   633 VEYTERMNWLCLSKRPLGPPHRKSSLPKHQEVKRRFLEI-------------------CDT---- 674
            :|.            ||       |.||.:|.|:|..::                   |.|    
Zfish   281 LEI------------PL-------STPKSRERKKRQQQLMTQISGVRKVTHGSGPSSSCSTTRFG 326

  Fly   675 --TFSEEVRAALRLPAFDSYEW-----SDADVIH------LMQTMFVELGFIEKFSIPVDTLREW 726
              |.||::   |.....|..:|     ..|:..|      :|..:|.|...::.|.|||||...:
Zfish   327 VKTDSEDM---LSKDLEDINKWGLNIFKVAEHSHHRPLACIMYAIFQERDLMKTFKIPVDTFVTY 388

  Fly   727 LYEVYKHYN-EVPFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNI 790
            :..:..||: :|.:||..|...|||..:.:.....|.:...|||.|..|.:...||:||||.:|.
Zfish   389 MMTLEDHYHADVAYHNSLHAADVAQSTHILLSTPALDAVFTDLEILAALFAAAIHDVDHPGVSNQ 453

  Fly   791 YQINARTELALRYNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMAR 855
            :.||..:||||.|||.|.|||||.::.|:||:...|::|:|.|:.....:|:.:|..:|||||::
Zfish   454 FLINTNSELALMYNDESVLENHHLAVGFKLLQGENCDLFQNLSKKERQTLRKMVIHMVLATDMSK 518

  Fly   856 HNEILTQFMEITP-----------IFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLL 909
            |..:|.....:..           :.:|::|..:   ...::..||:||..:|:|:.:.|.||::
Zfish   519 HMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQV---LRNMVHCADLSNPTKPLDLYKQWTDRIM 580

  Fly   910 QEFFAQSAAEKSEGLPVTPFMDPDKVSKPGSQVRFIGLVLLPLFEALGELV-PELTELI 967
            ||||.|...|:..|:.::|..|....|...|||.||..::.||:|...:|| |:..:::
Zfish   581 QEFFHQGDRERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVHPDAQDIL 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 82/239 (34%)
pde4bbXP_009296519.1 PDEase_I 402..643 CDD:278654 82/241 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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