DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and PDE1B

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_011536758.1 Gene:PDE1B / 5153 HGNCID:8775 Length:537 Species:Homo sapiens


Alignment Length:507 Identity:128/507 - (25%)
Similarity:199/507 - (39%) Gaps:115/507 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   603 YSILQLNNTIIQCHFNDDDFRALVKDLKRKVEYT------------------------------- 636
            |.:.||.|..|.           :::||:.:|||                               
Human    42 YMVKQLENGEIN-----------IEELKKNLEYTASLLEAVYIDETRQILDTEDELQELRSDAVP 95

  Fly   637 -ERMNWLC--LSKRPLGPPHRKSSLPKHQEVK-------------RRFLEICDTTFSEEVRAALR 685
             |..:||.  .:::......|....||.:.:.             ||.......|:|..|...|:
Human    96 SEVRDWLASTFTQQARAKGRRAEEKPKFRSIVHAVQAGIFVERMFRRTYTSVGPTYSTAVLNCLK 160

  Fly   686 ---LPAFDSYEWSDADVIHLMQTMFVEL----GFIEKFSIPVDTLREWL------YEVYKHYNEV 737
               |..||.:..:.|...|.::|:..||    ..|.:|.||...|..:|      |..||:    
Human   161 NLDLWCFDVFSLNQAADDHALRTIVFELLTRHNLISRFKIPTVFLMSFLDALETGYGKYKN---- 221

  Fly   738 PFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALR 802
            |:||..|...|.|.::....:..::..|.::|.|.::.:...||.:|.|..|.:.|..::|.|:.
Human   222 PYHNQIHAADVTQTVHCFLLRTGMVHCLSEIELLAIIFAAAIHDYEHTGTTNSFHIQTKSECAIV 286

  Fly   803 YNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEIT 867
            |||.|.|||||.|..|||::..|.|||.|.::|.|..:|..:|..:|||||:.|   ..|...:.
Human   287 YNDRSVLENHHISSVFRLMQDDEMNIFINLTKDEFVELRALVIEMVLATDMSCH---FQQVKTMK 348

  Fly   868 PIFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVTPFMDP 932
            .......|........:|:..||||:..:...|...|...|::|||.|...|...|||.:|..|.
Human   349 TALQQLERIDKPKALSLLLHAADISHPTKQWLVHSRWTKALMEEFFRQGDKEAELGLPFSPLCDR 413

  Fly   933 DKVSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRLNDAQTKTRKS------ 991
            .......||:.||..::.|.|..|    .::.|..:.|  :|.|      |:::|.:.|      
Human   414 TSTLVAQSQIGFIDFIVEPTFSVL----TDVAEKSVQP--LADE------DSKSKNQPSFQWRQP 466

  Fly   992 -----VADSNTSATS---------DSNSGTIDSNAAMVSTPGGASDKLSLDK 1029
                 |.|.|....|         ..|.......||     .|.::::|:|:
Human   467 SLDVEVGDPNPDVVSFRSTWVKRIQENKQKWKERAA-----SGITNQMSIDE 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 72/227 (32%)
PDE1BXP_011536758.1 PDEase_I_N 82..138 CDD:285672 6/55 (11%)
PDEase_I 223..450 CDD:278654 73/235 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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