DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and pde10a

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_017214212.1 Gene:pde10a / 394077 ZFINID:ZDB-GENE-040426-1115 Length:852 Species:Danio rerio


Alignment Length:923 Identity:195/923 - (21%)
Similarity:329/923 - (35%) Gaps:234/923 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 PLAAIDC------VCGSSSISLEAVSSRSRSSELEDDH----HEQDQVQEEQEQEQHQG------ 295
            |.....|      :|.|..:|:...:|..||....:.|    |.:..:.::::.....|      
Zfish     5 PCEGFSCQHPASFMCLSRQLSVYRYNSNIRSEPRTNRHQRTRHYRPAMSKKRKTPDDGGGGGELA 69

  Fly   296 DTED-------NEEEQEHPSEKPERTDIEEEPPPAIAVTTTTTATV----RRKSSSSSTISGTAT 349
            ||||       :|:.:.:.|..|:..|       ...:.:.::.||    :||||         |
Zfish    70 DTEDSLQQGLTDEKVKAYLSLHPQMLD-------EFVLESVSSETVDRWLKRKSS---------T 118

  Fly   350 VSGSVSVSASASQSFCSNNINLLEELLIQFYEEQDHRSNLTVIRHHHHQQHQQHQQQQRITNNNN 414
            .....|.:...|:.:...|:..:      .||...:                   .:||:....:
Zfish   119 QPADDSSAKEVSRQYQDTNMQSV------VYELNSY-------------------MEQRLDTGGD 158

  Fly   415 NN----NNCNSIQN---------------NNNMSNPAATAAATATPSV--EQPATSGTT-NIHLQ 457
            |.    ..||.|:.               ||::.....|.|....|.:  ..|.|.||| ..|:.
Zfish   159 NKLLLYELCNIIKTATKADGFALYFLGECNNSLCLFTPTGAKEGLPGLIPSGPITFGTTIAAHVA 223

  Fly   458 PT-------------SLPDGS--DNPRRRRASDCSAVQAALQNQLHCITLKNNNCGKAMPFHRGS 507
            .|             ..|.|:  |:..|..:..|..:..|:.:.:..:.| :.:.|:. ||:...
Zfish   224 KTRKTLLVEDIMGDERFPHGTGQDSGIRVHSVLCLPILTAIGDLIAILEL-HRHLGRE-PFNLSH 286

  Fly   508 CGAAGEHLLAANSIANRATII--LSKSCSNVDGDATATAATALSSTVGGGIGGIGGSIKMRASAT 570
            ...|..:|..|:...::..:.  |:|. :.::......:.|...:.|  .|..:...|.:.|.  
Zfish   287 QEVATANLAWASVAIHQVQVCRGLAKQ-TELNDFLLDVSKTYFDNIV--AIDSLLEHIMIYAK-- 346

  Fly   571 DIETNALNGARDAIVASNNGNNG--------NNGNNGNNEY----------------------SI 605
                |.:|..|.|:...::.|..        ...|.|...:                      .:
Zfish   347 ----NLVNADRCALFQVDHNNKELYSDLFDIGEENEGKPVFRKTKEIRFSIEKGIAGQVARTGEV 407

  Fly   606 LQLNNTIIQCHFNDDDFRALVKDLKRKVE----YTERMNWLCLSKRPL----------------- 649
            |.:.:......||            |:|:    ||.| |.||:   |:                 
Zfish   408 LNIPDAYADPRFN------------REVDLYTGYTTR-NILCM---PIVSRGTVIGVVQMVNKLG 456

  Fly   650 GPPHRKSS----------------------LPKHQEV-------KRRFLEICDTTFSEEVRAALR 685
            |....|:.                      ..:|.|.       |..:..||.   |||.:...:
Zfish   457 GSAFTKTDENNFKMFAVFCALALHCANMYHRIRHSECIYRVTMEKLSYHSICT---SEEWKTLTQ 518

  Fly   686 LPAFDSYEWSDADVIHLMQTMFVELG---FI-------EKFSIPVDTLREWLYEVYKHYNEVPFH 740
            | ...|..:.:.::.|.....|.||.   |:       .|.|..::.|..:...|.|:|..||:|
Zfish   519 L-TLPSAIYKEIELFHFDIAPFEELWPAIFVYMVHNSCGKTSFELEKLCRFTMSVRKNYRRVPYH 582

  Fly   741 NFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALRYND 805
            |::|...||..||||.::...:  ..:||...||::|:||||||.||:|.|.......||..|: 
Zfish   583 NWKHAVTVAHCMYAILQKTTGI--FTELERKGLLIACLCHDLDHRGYSNSYLQKFDHPLAALYS- 644

  Fly   806 ISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEI--TP 868
            .|.:|.||.|....:|:....|||.|.:...:..:.|.|.:.|:|||:|.:.....|..|:  |.
Zfish   645 TSTMEQHHFSQTVSILQLEGHNIFSNLTSGEYEQVLEIIRKAIIATDLALYFGNRKQLAELLSTG 709

  Fly   869 IFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVTPFMDPD 933
            ..|.:||||.:.:..:::...|:.:..:...|.....:.:..||:|:....|..|:.....||.|
Zfish   710 ALDLNNRAHRDRVIGLMMTACDLCSVTKLWPVTRLTANDIYAEFWAEGDEMKKIGMQPISMMDRD 774

  Fly   934 KVSK-PGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRLNDAQTKTRKSVADSNT 997
            |..: |..||.|...|.:|.:..|.||.|....|:........::.|.:.........|..::..
Zfish   775 KKDEVPQGQVGFYNAVAIPCYTTLSELFPPSVPLLEACRENLSQWERIVQGEDVSAWSSTEEAEV 839

  Fly   998 SATSDSNSGTIDS 1010
            |.||||....:|:
Zfish   840 SETSDSGPVKVDN 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 73/230 (32%)
pde10aXP_017214212.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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