DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and pde6c

DIOPT Version :10

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_957165.1 Gene:pde6c / 393845 ZFINID:ZDB-GENE-040426-1664 Length:852 Species:Danio rerio


Alignment Length:439 Identity:109/439 - (24%)
Similarity:192/439 - (43%) Gaps:67/439 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   638 RMNWLCLSKRPLGPPHRKSSLPKHQEV---KRRF---LEICDTTFSEEVRAALR--LP------- 687
            ||.|.......:.....|::..:.|::   |.:|   .|.||   .:|:...||  :|       
Zfish   440 RMEWRKEIAEEMVMYQTKATPAEVQQILNTKEKFDQNPEDCD---QKEMYKLLRANIPEAKDVDL 501

  Fly   688 ---AFDSYEWSDADVIHLMQTMFVELGFIEKFSIPVDTLREWLYEVYKHYNEVPFHNFRHCFCVA 749
               :|..:..::.|:|......|.|||.:|||.:|.:.|..|:|.|.|.|.::.:||:||.|.|.
Zfish   502 LEFSFSDFPLTETDLIKCGIRCFFELGVVEKFKVPAEVLTRWMYTVRKGYRDITYHNWRHGFNVG 566

  Fly   750 QMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALRYNDISPLENHHC 814
            |.|:.:.:...|.....||:...::.:..|||:||.|.||:||..:.:.|| :.:..|.||.||.
Zfish   567 QTMFCLLQTGKLRRYYTDLDAFAMVAAAFCHDIDHRGTNNLYQTKSASPLA-KLHGSSILERHHL 630

  Fly   815 SIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEITPIFDYSNR---- 875
            ..:..|:.....|||::..:..|..::.....||:|||:|.:.:..|.|.:|....:...:    
Zfish   631 QYSKNLMAEENVNIFQSLQKRQFETVQHLHDVCIIATDLALYFKKRTMFQKIVDATEPMTKEEEM 695

  Fly   876 -AHI-------NLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKS--EGLPVTPFM 930
             ||:       .::..:::...|:|...:|.:|.......:..||:.|...|::  :..|: |.|
Zfish   696 VAHVANNPIRKEIIMAMMMTGCDLSAITKPWEVQSKVALMVAAEFWEQGDLERTVLDQQPI-PMM 759

  Fly   931 DPDKVSK-PGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRLNDAQTKTRKSVAD 994
            |.:|..: |..|..||..|...:::.......|:|.:           :..||:.:...::    
Zfish   760 DRNKSDELPKMQCGFIDFVCSFVYKEFSRFHKEITPM-----------FDGLNNNRVHWKE---- 809

  Fly   995 SNTSATSDSNSGTIDSNAAMVSTPGGASDKLSLDKGQGNSQGSGGGGGG 1043
                 .:|.....||:.         |::|..|::.|....|..||.||
Zfish   810 -----LADIYQAKIDAI---------ANEKKRLEEEQAKKGGEEGGEGG 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:459723 64/242 (26%)
pde6cNP_957165.1 GAF 72..224 CDD:214500
GAF 252..439 CDD:214500
PDEase_I 556..800 CDD:459723 64/256 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.