DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and Pde8

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster


Alignment Length:1181 Identity:251/1181 - (21%)
Similarity:424/1181 - (35%) Gaps:376/1181 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SSSRRGSSSAAAATSTAATAAET---AAAAAATTTSSS-----------DEETLETLTIITTTIT 60
            ||::..||||.....::...::|   |.|.||.:..|.           |::::.: .:|:....
  Fly    16 SSAKSSSSSAGRENPSSEPDSDTEPYAIAIAAISDRSGDNRNERPRPLPDDDSIRS-RLISAAHL 79

  Fly    61 DSDI--HATTTTTTVIASG--------------TATTAAAAA---------TTATLA-TLATLAS 99
            |.|:  ...:.:|.|.|:|              ..|.:||.:         |:..:| :|..:..
  Fly    80 DLDVGLELASDSTAVPANGGIRPKSEGACPEMKVETISAATSPPPPRPLHGTSGPVAISLPFVGR 144

  Fly   100 NS-------DIEDSSPVESEDSEECEYIEIDCQTTAQEGTSPSGGSSSSGNAVLLQRSSNNLQQQ 157
            ||       ::|..:.||:|..        |..|..:..|.|...|...|..    ||:      
  Fly   145 NSSKTPEEMELEYEANVEAESR--------DIMTPLRRNTRPLSVSFGGGGG----RSA------ 191

  Fly   158 QQQQQQQQQHLQLQLQQADERLLRKIGYIASRVRCLSKYYGDFRLVNPYSARRQRRQLQEILLRH 222
                      ||.::.:|    :|.:...|.|:..|| :.|.   .:|   :.:|...:|..|  
  Fly   192 ----------LQPEIVEA----IRSLDVPALRLNNLS-FDGS---TDP---KGERNHAEEEPL-- 233

  Fly   223 SIFDPGKEHQRAIVLAAATAAIAGPLAAIDCVCGSSSISLEAVSSRSRSSELEDDHH-----EQD 282
               .||.:|:.::||.          ..::|      :..:|.|...|........|     :::
  Fly   234 ---TPGHDHEDSVVLR----------RKVNC------LERKAHSLYERRLPRVPKLHLLVAGKKN 279

  Fly   283 QVQEEQEQEQHQGDTEDNEEEQEHPSEKPERTDIEEEPPPAI----------AVTTTTTATVRRK 337
            ...||:|....|.:..|    .::|:..|        |.|.:          ::....||..:|.
  Fly   280 PPTEEEEFRTFQRNLMD----LKYPTVLP--------PNPPLKALLVFHKSDSICEAITAACQRH 332

  Fly   338 SSSSSTISGTATVSGSVSVSASASQSF--------CSNNINLLEELLIQFYEEQDHRSNLTVIRH 394
            ....:.:........::..|.:.:|.:        .|.|:            :.:|.:......|
  Fly   333 QLDVTLVKSKEEALDTLQKSYATAQCYHLIIIDARSSKNL------------DAEHIARTIRHTH 385

  Fly   395 HHH--------QQHQQHQQQQRITNNNNNNNNCNSIQNNNNMSNPAATAAATATPSVEQPATSGT 451
            .||        ::....:....|...:...|.|                            .:.|
  Fly   386 GHHLTTIIAVCKKSFFEKDDVLIALLDAGVNRC----------------------------VAET 422

  Fly   452 TNIHLQPTSLPDGSDNPRRRRASDCSAVQAALQNQLHCITLKNN--NCGKAM--PFHRGSCGAAG 512
            ||:.:                   ||   ..|:..||.|...:|  :..:|:  ..||     ..
  Fly   423 TNLAM-------------------CS---VELKQILHSIIRPHNVMSTQQALYTALHR-----LK 460

  Fly   513 EHLLAANSI-----ANRAT----------II--------------LSKSCSNV---DGDAT---- 541
            |.:|..:.:     |||||          ||              :|:.|.|:   ||..|    
  Fly   461 EVVLITDDLLRIQYANRATERLLNMRLDEIISKQLEDIFVSDLSTISEQCKNIKEFDGILTVRRK 525

  Fly   542 -----------------ATAATAL---SSTVGGGIGGIG----------GSI-KMRASATDIETN 575
                             .:|.|.|   ....||.:..|.          ||: .:|..:.|:.:.
  Fly   526 SQEGIPMHVRVVPVACIGSAPTHLIFNFDVPGGQMDFIATLPQPKEAPRGSLHSVRRCSFDVRSI 590

  Fly   576 ALNGARDAIVASNNGNNGNNGNNGNNEYSILQLNNTIIQCHFN--DDDFRAL---VKDLKRKVEY 635
            |.:|.|...:|..        .:...|..|.::.|.:.|...|  .|:.|.:   ::.|||:..|
  Fly   591 ASDGLRRTSLAKL--------TSLPLEAPITKIINLLSQVQENCSADEARLIDKVLEFLKREGLY 647

  Fly   636 TERMNWL------------CLSKRPLGPPHRKSS----------------LPKHQEVKRRFLEIC 672
            :.:|..:            .|...|.....|:||                :|...:.....:|:.
  Fly   648 SPQMKEIRTDDPIATDLIGALLTGPSVYSSRRSSNDSIIRTGSSTRTAAIVPAKMKSNPIIMELL 712

  Fly   673 DTTFSEEVRAALRLPAFDSYEWSDA----DVIHLMQTMFVELGFIEKFSIPVDTLREWLYEVYKH 733
            |.:.|.:         ||.::..:.    .:::|...||.........:|..:..:.||..:..|
  Fly   713 DESLSWD---------FDIFKLEEITDYHPLLYLGMEMFRRFDVFATLNIDENVCKAWLAVIEAH 768

  Fly   734 YNEV-PFHNFRHCFCVAQMMYA-ITRQAN----LLSRLGDLECLILLVSCICHDLDHPGYNNIYQ 792
            |.:. .:||..|...|.|...| ||:..|    ::.|:.:...||   :...||:||||.::.:.
  Fly   769 YRKSNTYHNSTHAADVMQATGAFITQLTNKDMLVMDRMEEATALI---AAAAHDVDHPGRSSAFL 830

  Fly   793 INARTELALRYNDISPLENHHCSIAFRL-LEHPECNIFKNFSRDTFNNIREGIIRCILATDMARH 856
            .|:...||:.|||::.|||||.:|.|:| |...:.|||||..::|:.:.|..||..||||:|.||
  Fly   831 CNSNDALAVLYNDLTVLENHHAAITFKLTLGDDKINIFKNLDKETYKSARSTIIDMILATEMTRH 895

  Fly   857 NEILTQFMEI---------TPIFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEF 912
            .|.|.:|:.:         .|..|.....   |:..:||||||:||.||||.....|..|:.:|:
  Fly   896 FEHLAKFVSVFGGEEPRDHNPQTDEETSI---LMRRMLIKVADVSNPARPMQFCIEWARRIAEEY 957

  Fly   913 FAQSAAEKSEGLP-VTPFMDPDKVSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALE 976
            |.|:..||...|| |.|..|....|.|.||:.||..::..:..|....: ::.:||.        
  Fly   958 FMQTDEEKQRHLPIVMPMFDRATCSIPKSQIGFIEYIIQDMMHAWESFI-DMPQLIT-------- 1013

  Fly   977 YYRRLNDAQTK 987
             |.::|.:|.|
  Fly  1014 -YMQINYSQWK 1023

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 86/243 (35%)
Pde8NP_001163275.2 PAS 459..539 CDD:238075 15/79 (19%)
PAS_9 463..539 CDD:290162 14/75 (19%)
PDEase_I 775..1016 CDD:278654 89/256 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459135
Domainoid 1 1.000 82 1.000 Domainoid score I1950
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46491
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11347
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2223
SonicParanoid 00.000 Not matched by this tool.
76.980

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