DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and Pde1c

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster


Alignment Length:1264 Identity:269/1264 - (21%)
Similarity:446/1264 - (35%) Gaps:382/1264 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QDSGCSSSSSRRGSSSAAAATSTAATAAETAAAAAATTTSSSDEETLETLTIITTTITDSDIHAT 67
            :|.......|..|:|.||.::|::...|.:.||:.:...:|.                       
  Fly   165 RDEASGGPGSSGGTSGAATSSSSSGGGAASGAASGSVGPASG----------------------- 206

  Fly    68 TTTTTVIASGTA---TTAAAAATTATLATLATLASNSDIEDS-------SPVESEDSEECEYIEI 122
            |.|.|..|||.|   :|.|..|.:.|::.|:...||:.|...       :.:...:|.  .:.:.
  Fly   207 TATGTGSASGGAGGVSTPAQEAASPTVSELSGSGSNATINGQVARHGSLTIIRRTNSR--NFTQF 269

  Fly   123 DCQ-----TTAQEGTSP------------------------SGGSSSSGNAVLLQRSSNNLQQQQ 158
            |.|     :||...|:|                        |.||:|:|::    ||||    |.
  Fly   270 DGQLASPSSTACSSTAPGIGFAQTPLSEPLAERLSFRASGGSNGSASAGDS----RSSN----QG 326

  Fly   159 QQQQQQQQHLQLQLQQADERLLRKIGYIASRVRCLSKYYGDFRLVNPYSARRQRRQLQEILLRHS 223
            ...........:::|.:..   ....|:|..::..|               ....|.:.::.|.|
  Fly   327 PSNSGPAASAAVKMQPSSP---NATNYLADNIQISS---------------ANLSQTEMVVGRDS 373

  Fly   224 IFDPGKEHQRAIVLAAATAAIAGPLAAIDCVCGSSSISLEAVSSRSRSSELEDDHHEQDQVQEEQ 288
                          |..||     :.:|:...|:|.:                            
  Fly   374 --------------ADYTA-----MHSINVGVGNSFL---------------------------- 391

  Fly   289 EQEQHQGDTEDNEEEQEHPSEKPERTDI------EEEPPPAIAVTTTTTATVRRKS--------- 338
                 :||| |..:|..|..|.|.....      .|..||.........|..|.:|         
  Fly   392 -----RGDT-DIPQESGHSFETPSNMSFTAGQWDTESLPPVDTPDALNKAAGRIRSLLRRMDHET 450

  Fly   339 ----SSSSTISGTATVSGSVSVSASASQSFCSNNINLLEELLIQFYEEQDHRSNLTVIRHHHHQQ 399
                .....:...|.|..:|.:  ..|:..|:.|.                 .||...||.|.:.
  Fly   451 VAYEDMQRNLHYAARVLEAVFI--DESREGCNGNC-----------------KNLNCSRHSHGRD 496

  Fly   400 HQQHQQQQRITNNNNNNNNCNSIQNNNNMSNPAATAAATATPSVE-----QPATSGTT---NIHL 456
            .||.       :|||:|.:| |:|.    ::|.. |.|..||..:     :..|.|.:   ..|.
  Fly   497 DQQQ-------DNNNSNRSC-SLQE----ASPGG-AGAGVTPGADNQDSIESRTKGVSQAPQTHS 548

  Fly   457 QPTSLPDGSDNPRRRRASDCSAVQAALQNQLHCITLKNNNCGKAMPFHRGSCGAAGEHLLAANSI 521
            .||..|  |:......|.....:|.||:      |::.:                          
  Fly   549 GPTGPP--SNTSSETIAQPAPKLQPALE------TVRES-------------------------- 579

  Fly   522 ANRATIILSKSCSNVDGD---------ATATAATALSSTVGGGIGGIGGSIKMRASATDIETNAL 577
                  ::.:|.|...||         :|.|:.|..||           |.....||...|:.| 
  Fly   580 ------VMEESPSKDPGDKGPPPPASTSTLTSQTTTSS-----------SATAEPSAKAAESQA- 626

  Fly   578 NGARDAIVASNNGNNGNNGNNGN-------------NEYSILQLNNTIIQCHFNDDDFRALVKDL 629
                        |:.|::|:..|             .....:..|.|.:.   ::||   .:.::
  Fly   627 ------------GSAGSSGSCSNPAAVHRQRRLRTPTWARSMSTNKTRLA---DEDD---ELSEV 673

  Fly   630 KRKVEYTERMNWLCLS-KRPLGPPHRKS-SLPKHQEVK-------------RRFLEICDTTFSEE 679
            :......|...||..: .|.:....||| ..||.:.|.             ||......|.|..:
  Fly   674 QPDAVPPEVREWLASTFTRQMATSRRKSDEKPKFRSVAHAIRAGIFVDRMYRRVSSSALTAFPPD 738

  Fly   680 VRAALRLP---AFDSYEWSDAD----VIHLMQTMFVELGFIEKFSIPVDTLREWLYEV---YKHY 734
            |...|:..   .||.:..::|.    |.::...:|...|.|.||.|....|..:|:.|   |..|
  Fly   739 VVRLLKNLDDWTFDVFALTEAASGQVVKYVAYELFNRYGSIHKFKIAPGILEAFLHRVEEGYCRY 803

  Fly   735 NEVPFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTEL 799
            .. |:||..|...|.|.::.......|::.|.|||....|::.:.||.:|.|..|.:.:.:.:|.
  Fly   804 RN-PYHNNLHAVDVMQTIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTTNNFHVMSGSET 867

  Fly   800 ALRYNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFM 864
            ||.|||.:.|||||.|.:||||...|.||..:.||:.|..:|..:|..:|.|||..|.:.:....
  Fly   868 ALLYNDRAVLENHHASASFRLLREDEYNILSHLSREEFRELRGLVIEMVLGTDMTNHFQQMKAMR 932

  Fly   865 EITPIFDYSNRAHIN---LLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPV 926
            ::..:    ..|.|:   :|.::| ...|||:.|:...|...|...||:|||.|...||..|||.
  Fly   933 QLLTL----QEATIDKQKVLSLVL-HCCDISHPAKQWGVHHRWTMLLLEEFFRQGDLEKELGLPF 992

  Fly   927 TPFMDPDKVSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRLNDAQTKTRKS 991
            :|..|.:......||:.||..::.|   ::| ::.::.|||:.|:       ..:|.::..|   
  Fly   993 SPLCDRNNTLVAESQICFIDFIVEP---SMG-VMSDMLELILAPI-------APMNKSKPAT--- 1043

  Fly   992 VADSNTSATSDSNSGTIDSNAAMVSTPGGASDKLSLDKGQGNSQGSGGGGGGGGGGGAGGGTGSG 1056
            :.:..|:|.|.:||..:..|:.:  ||       |:||.:.:..             ....|.:.
  Fly  1044 LVEHETTANSTTNSAIVIPNSGI--TP-------SMDKPRDHRT-------------EAKTTAAE 1086

  Fly  1057 C--GSNAAGSVSPQ--MPRSGSGISVKSRRSIPSQ------KSASRTSVDEPGGMASELHDLPEG 1111
            |  ..:..|:.:.:  :|:......|:::|....|      ..|..|:.:|....|:        
  Fly  1087 CLARKSVTGTTASKFNIPKPWLTCLVENKRIWKEQAVKDAEARALATAAEEAAAAAA-------- 1143

  Fly  1112 SESGDSETATEVDVAEKTSKFKVDTEGSS 1140
            :|:.:|:..||....|::.......:|::
  Fly  1144 AEAEESKPETETADGEQSEPAAEPADGAA 1172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 75/230 (33%)
Pde1cNP_001137817.1 PDEase_I_N 666..722 CDD:285672 12/58 (21%)
PDEase_I 807..1026 CDD:278654 74/227 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 1.000 Domainoid score I1950
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46491
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11347
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.