DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and dnc

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster


Alignment Length:1265 Identity:282/1265 - (22%)
Similarity:452/1265 - (35%) Gaps:386/1265 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RGSSSAAAATSTAATAAETAAAAAATTTSSSDEETLETL-----------TIITTTITDS--DIH 65
            ||..|||.|||...|.|:|...........:.|::.|..           .::..|::.|  |::
  Fly   101 RGGGSAAPATSPPQTPAQTPDELKVIPEDCNLEKSAEQKRDLLERNNKEDDLLNRTVSGSELDLY 165

  Fly    66 ATTTTTTVIASGTATTAAAAATTATLATLATLASNSDIEDSSPVESEDSEECEYIEIDCQTTAQE 130
            ......|...|...|...:..|..:|.||.     :|:::               |:|.|.:|.:
  Fly   166 GGAGGGTKKHSLADTIDTSVTTPISLKTLI-----NDVDE---------------ELDQQLSAAD 210

  Fly   131 ---GTSPSGGSSSSGNAVLLQRSSNNLQQQQQQQQQQQQHLQLQLQQADERLLRKIGYIASRVRC 192
               .:..||..:.......|..:|.:.....||||||||.||..|.|:....:...|.|.|:|  
  Fly   211 IAAASLASGLVARRAEPETLSDASVSPTAVVQQQQQQQQQLQQPLLQSQPHFVPSSGNILSQV-- 273

  Fly   193 LSKYYGDFRLVNPYSARRQRRQLQEILLRHSIFDPGKEHQRAIVLAAATAAIAGPLAAIDCVCGS 257
             :.|.|.....||                                                 |.|
  Fly   274 -TLYSGSNPSTNP-------------------------------------------------CQS 288

  Fly   258 SSISLEAVSSRSRSSELEDDHHEQDQVQEEQEQEQHQGDTE-----DNEEEQEHPSEKPERTDIE 317
                  ||.::.::|....:.:......:.|::...|..|.     ..|||.:..:.|.:.:..|
  Fly   289 ------AVQNQGQNSNPNPNQNPNTNPNQNQQRCSCQPQTSPLPHIKEEEESDQANFKHQTSLKE 347

  Fly   318 EEP-PPAIAVTT---TTTATVRRKSSSSST--------------ISGT-ATVSGSVSVSASASQS 363
            .:| ||.|.:.|   .:..:|...|::||:              |:|| :|.|..:.:.......
  Fly   348 HQPLPPPITIATGYCGSCESVHHSSATSSSAGTVPPGGQQTQEYIAGTSSTPSPRIKLKFRKPHK 412

  Fly   364 FCSNNINLLEELLIQFYEEQDHRSNLTVIRHHHHQQHQQHQQQQRITNNNNNNNNCNSIQNNNNM 428
            .|.:.|     :|..........|..|||..:         ..:.:.:::.......:.||::::
  Fly   413 SCWSRI-----VLAPIGSAGGSSSATTVIGSN---------SNETLASSSTTGGTATTTQNSSSV 463

  Fly   429 S--------NPAATAAATATPSVEQPATSGTTNIHLQPTS---LPDGSDNPRRRRASDCSAVQAA 482
            |        :.:|:|.||:.||          |..|.|||   ...||....::..|      ..
  Fly   464 SVAAHHRLTSSSASALATSHPS----------NSQLLPTSKMQAEQGSIGDLQKYHS------RY 512

  Fly   483 LQNQLHCITLKN------NNCGKAMPFHRGSCGAAGEHLLAANSIANRATIILSKSCSNVDGDAT 541
            |:|:.|  ||.|      |..|...|...||..|.    |...::..|....|.:|.|  |.:.:
  Fly   513 LKNRRH--TLANVRFDVENGQGARSPLEGGSPSAG----LVLQNLPQRRESFLYRSDS--DFEMS 569

  Fly   542 ATAATALSSTVGGGIGGIGGSI----------------KMRASATDIETNALNGARDAIVASNNG 590
            ..:.:..||...........||                ::.||...:..|.|:...  :.|||..
  Fly   570 PKSMSRNSSIASERFKEQEASILVDRSHGEDLIVTPFAQILASLRSVRNNLLSLTN--VPASNKS 632

  Fly   591 NNGN-------NGN-------NGNNEYSILQLNNTI------------IQCHFNDDDF------R 623
            ...|       :||       .|...|:.| ..:||            ||.|.:..|.      |
  Fly   633 RRPNQSSSASRSGNPPGAPLSQGEEAYTRL-ATDTIEELDWCLDQLETIQTHRSVSDMASLKFKR 696

  Fly   624 ALVKDLKRKVEYTERMN----WLC---------------------------------------LS 645
            .|.|:|....|.:...|    ::|                                       .|
  Fly   697 MLNKELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLRVEDNPELVAANAAAGQQSAGQYARS 761

  Fly   646 KRPLGPPHRKSSLPKHQEVKRRFLEICDTTFSEEVRAALRLPAF-----------------DSY- 692
            :.|.|||..:.|     .|||....  ..:|:.|     |||.|                 |:: 
  Fly   762 RSPRGPPMSQIS-----GVKRPLSH--TNSFTGE-----RLPTFGVETPRENELGTLLGELDTWG 814

  Fly   693 -------EWS-DADVIHLMQTMFVELGFIEKFSIPVDTLREWLYEVYKHY-NEVPFHNFRHCFCV 748
                   |:| :..:..:..|:|.....:....||..|...::..:..|| .:.||||..|.   
  Fly   815 IQIFSIGEFSVNRPLTCVAYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHA--- 876

  Fly   749 AQMMYAITRQANLLSRLGDLECLI--------LLVSCICHDLDHPGYNNIYQINARTELALRYND 805
                ..:|:..|:|.....||.:.        |..:|| ||:||||..|.:.:|:.:||||.|||
  Fly   877 ----ADVTQSTNVLLNTPALEGVFTPLEVGGALFAACI-HDVDHPGLTNQFLVNSSSELALMYND 936

  Fly   806 ISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEITP-- 868
            .|.|||||.::||:||::..|:||.|..:.....:|:.:|..:|:|||::|..:|.....:..  
  Fly   937 ESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETK 1001

  Fly   869 ---------IFDYSNRAHI--NLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSE 922
                     :.:|::|..:  |     |:..||:||..:|:.:.:.|:..|::|||.|...|:..
  Fly  1002 KVAGSGVLLLDNYTDRIQVLEN-----LVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERES 1061

  Fly   923 GLPVTPFMDPDKVSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRL------ 981
            |:.::|..|....:...|||.||..::.||:|...:||....:.|:..:....:||:.:      
  Fly  1062 GMDISPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPP 1126

  Fly   982 ------NDAQTKTRKSVA-------------DSNTSATSDSNSGTIDSNAAMVSTPGGASDKLSL 1027
                  |..:.:.|..|.             :.:.|....:.:||..:.||              
  Fly  1127 PSGVDENPQEDRIRFQVTLEESDQENLAELEEGDESGGESTTTGTTGTTAA-------------- 1177

  Fly  1028 DKGQGNSQGSGGGGGGGGGGGAGGGTGSGC 1057
                  |..||.|||||||||....|| ||
  Fly  1178 ------SALSGAGGGGGGGGGMAPRTG-GC 1200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 78/248 (31%)
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 79/253 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459136
Domainoid 1 1.000 82 1.000 Domainoid score I1950
eggNOG 1 0.900 - - E1_KOG3689
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46491
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11347
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2223
SonicParanoid 00.000 Not matched by this tool.
87.880

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