DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and Pde6b

DIOPT Version :10

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_001099494.1 Gene:Pde6b / 289878 RGDID:1311039 Length:856 Species:Rattus norvegicus


Alignment Length:360 Identity:102/360 - (28%)
Similarity:167/360 - (46%) Gaps:55/360 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   689 FDSYEWSDADV----IHLMQ---TMFVELGFIEKFSIPVDTLREWLYEVYKHYNEVPFHNFRHCF 746
            ||.||:..:|:    :.|::   .|:.|||.:.||.||.:.|..:|:.|.|.|..:.:||:||.|
  Rat   499 FDIYEFHFSDLECTELELVKCGIQMYYELGVVRKFQIPQEVLVRFLFSVSKAYRRITYHNWRHGF 563

  Fly   747 CVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALRYNDISPLEN 811
            .|||.|:.:.....|.|...|||...::.:.:|||:||.|.||:||:.::..|| :.:..|.||.
  Rat   564 NVAQTMFTLLMTGKLKSYYTDLEAFAMVTAGLCHDIDHRGTNNLYQMKSQNPLA-KLHGSSILER 627

  Fly   812 HHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEITPIFDYS--- 873
            ||......||.....||::|.:|....::...:...|:|||:|.:.:..|.|.:|.   |.|   
  Rat   628 HHLEFGKFLLAEESLNIYQNLNRRQHEHVIHLMDIAIIATDLALYFKKRTMFQKIV---DESKNY 689

  Fly   874 --NRAHINLLCM----------ILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKS--EGL 924
              .::.:..|.:          :::...|:|...:|.:|.......:..||:.|...|::  :..
  Rat   690 EDKKSWVEYLSLETTRKEIVMAMMMTACDLSAITKPWEVQSKVALLVAAEFWEQGDLERTVLDQQ 754

  Fly   925 PVTPFMDPDKVSK-PGSQVRFIGLV--------------LLPLFEALGELVPELTELIIIPVRIA 974
            |: |.||.:|.:: |..||.||..|              :||:|:.|.....|...|       |
  Rat   755 PI-PMMDRNKAAELPKLQVGFIDFVCTFVYKEFSRFHEEILPMFDRLQNNRKEWKAL-------A 811

  Fly   975 LEY---YRRLNDAQTKTRKSVADSNTSATSDSNSG 1006
            .||   .:.|.:.:.|....|| :..:.|...|.|
  Rat   812 DEYEAKVKALEEEKKKEEDRVA-AKKAGTEICNGG 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:459723 72/259 (28%)
Pde6bNP_001099494.1 GAF 71..230 CDD:214500
GAF 252..439 CDD:214500
PDEase_I 556..800 CDD:459723 70/248 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.