DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde9 and Pde4d

DIOPT Version :10

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_001106799.1 Gene:Pde4d / 24627 RGDID:3281 Length:803 Species:Rattus norvegicus


Alignment Length:781 Identity:178/781 - (22%)
Similarity:286/781 - (36%) Gaps:206/781 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 RHHHHQQHQQHQQQQRITNNNNNNNNCNSIQNNNNMSNPAATAAATATPSVEQPATSGTTNIHLQ 457
            ||..|.|:...|.|.|:            :..::::..|        .|...||        .||
  Rat    34 RHEQHHQYPLRQPQFRL------------LHPHHHLPPP--------PPPSPQP--------QLQ 70

  Fly   458 PTSLP------------------DGSDNPRRRRASD------CSAVQ------------------ 480
            |...|                  .|:...|.|..||      |.|:.                  
  Rat    71 PPPPPPLPPPPPPPGATRGRYASSGASRVRHRGYSDTERYLYCRAMDRTSYAVETGHRPGLKKSR 135

  Fly   481 ----AALQNQLHCITLKNNNCGKAMPFHRGSCGAAGEHLLAANSI-ANRATIILSKSCSNVDGDA 540
                ::.|. |....:.|.......|....:...:| .:|.||.: :.|....|.:|.|:.|   
  Rat   136 MSWPSSFQG-LRRFDVDNGTSAGRSPLDPMTSPGSG-LILQANFVHSQRRESFLYRSDSDYD--- 195

  Fly   541 TATAATALSSTVGGGIGG----IGGSIKMRASATDIETN--ALNGARDAIVASN----NGNNGNN 595
            .:..:.:.:|::...|.|    :....::.||...:..|  ||...:|...:..    |..:.|.
  Rat   196 LSPKSMSRNSSIASDIHGDDLIVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINK 260

  Fly   596 GNNGNNEY------------------SILQLNNTIIQCHFNDDDFRALVKDLKRKVEYTERMNWL 642
            .......|                  ..||..:::.:...|... |.|.::|....|.:...|.:
  Rat   261 ATITEEAYQKLASETLEELDWCLDQLETLQTRHSVSEMASNKFK-RMLNRELTHLSEMSRSGNQV 324

  Fly   643 C--LSKRPLGPPHR---KSSLPKHQEVKRR----------------FLEICDTTF--SEEVRAAL 684
            .  :|...|...|.   .|...|.:|.|:|                ....|...|  ..|....|
  Rat   325 SEYISNTFLDKQHEVEIPSPTQKEKEKKKRPMSQISGVKKLMHSSSLTNSCIPRFGVKTEQEDVL 389

  Fly   685 RLPAFDSYEWSDADVIH---------------LMQTMFVELGFIEKFSIPVDTLREWLYEVYKHY 734
            .....|..:|.    :|               :|.|:|.|...::.|.||||||..:|..:..||
  Rat   390 AKELEDVNKWG----LHVFRIAELSGNRPLTVIMHTIFQERDLLKTFKIPVDTLITYLMTLEDHY 450

  Fly   735 N-EVPFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTE 798
            : :|.:||..|...|.|..:.:.....|.:...|||.|..:.:...||:||||.:|.:.||..:|
  Rat   451 HADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVSNQFLINTNSE 515

  Fly   799 LALRYNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQF 863
            |||.|||.|.|||||.::.|:||:...|:||:|.::....::|:..|..:|||||::|..:|...
  Rat   516 LALMYNDSSVLENHHLAVGFKLLQEENCDIFQNLTKKQRQSLRKMAIDIVLATDMSKHMNLLADL 580

  Fly   864 MEITP-----------IFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSA 917
            ..:..           :.:||:|..:   ...::..||:||..:|:.:...|.||:::|||.|..
  Rat   581 KTMVETKKVTSSGVLLLDNYSDRIQV---LQNMVHCADLSNPTKPLQLYRQWTDRIMEEFFRQGD 642

  Fly   918 AEKSEGLPVTPFMDPDKVSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRL- 981
            .|:..|:.::|..|....|...|||.||..::.||:|...:||....:.|:..:....|:|:.. 
  Rat   643 RERERGMEISPMCDKHNASVEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEDNREWYQSTI 707

  Fly   982 -----------------------------NDAQTKTRK----------SVADSNTSATSDSNSGT 1007
                                         .|.::.|.|          |.:||.|..|.||.|..
  Rat   708 PQSPSPAPDDQEDGRQGQTEKFQFELTLEEDGESDTEKDSGSQVEEDTSCSDSKTLCTQDSESTE 772

  Fly  1008 I 1008
            |
  Rat   773 I 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:459723 78/238 (33%)
Pde4dNP_001106799.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..103 17/96 (18%)
PDE4_UCR 218..334 CDD:465648 18/116 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 338..358 5/19 (26%)
PDEase_I 456..696 CDD:459723 79/242 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 705..724 0/18 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 732..803 12/42 (29%)

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