DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and Pde4d

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_006517706.1 Gene:Pde4d / 238871 MGIID:99555 Length:803 Species:Mus musculus


Alignment Length:885 Identity:197/885 - (22%)
Similarity:320/885 - (36%) Gaps:251/885 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 SSISLEAVSSRSRSSE-----------LEDDHHEQDQVQEEQEQEQHQGDTEDNEEEQEH----- 306
            ||:...|||.....|.           ...:.|.|..:::.|.:..|         ...|     
Mouse     6 SSVPARAVSEEGNDSAGGAALKAPKHLWRHEQHHQYPLRQPQFRLLH---------PHHHLPPPP 61

  Fly   307 -PSEKPERTDIEEEPPPAIAVTTTTTATVRRKSSSSSTISGTATVSGSVSVSASASQSFCSNNIN 370
             ||.:|:   ::..|||.:..........|.:.:|    ||.:.|... ..|.:....:|    .
Mouse    62 PPSPQPQ---LQPPPPPPLPPPPPPPGATRGRYAS----SGASRVRHR-GYSDTERYLYC----R 114

  Fly   371 LLEELLIQFYEEQDHRSNLTVIRHHHHQQHQQHQQQQRITNNNNNNNNCNSIQNNNNMSNPAATA 435
            .::.  ..:..|..||..|   :..........|..:|...:|..:...:.:   :.|::|.:..
Mouse   115 AMDR--TSYAVETGHRPGL---KKSRMSWPSSFQGLRRFDVDNGTSAGRSPL---DPMTSPGSGL 171

  Fly   436 AATATPSVEQPATS----GTTNIHLQPTSLPDGSDNPRRRRASDC----------SAVQAALQNQ 486
            ...|.....|...|    ..::..|.|.|:...|.     .|||.          :.|.|:|:  
Mouse   172 ILQANFVHSQRRESFLYRSDSDYDLSPKSMSRNSS-----IASDIHGDDLIVTPFAQVLASLR-- 229

  Fly   487 LHCITLKNN-----NCGKAMPFHRGSCGAAGEHLLAANSIANRATI-------ILSKSCSNVDG- 538
                |::||     |.....|..|..        :......|:|||       :.|::...:|. 
Mouse   230 ----TVRNNFAALTNLQDRAPSKRSP--------MCNQPSINKATITEEAYQKLASETLEELDWC 282

  Fly   539 -DATATAATALSSTVGGGIGGIGGSIKMRASATDIETN----ALNGARDAIVASNNGNNGNNGNN 598
             |...|..|                   |.|.:::.:|    .||  |:....|....:||.   
Mouse   283 LDQLETLQT-------------------RHSVSEMASNKFKRMLN--RELTHLSEMSRSGNQ--- 323

  Fly   599 GNNEYSILQLNNTIIQCHFNDDDFRALVKDLKRKVEYTERMNWLCLSKRPLGPPHRKSSLPKHQE 663
             .:||    ::||.:              |.:.:||.                   .|...|.:|
Mouse   324 -VSEY----ISNTFL--------------DKQHEVEI-------------------PSPTQKEKE 350

  Fly   664 VKRR----------------FLEICDTTF--SEEVRAALRLPAFDSYEWSDADVIH--------- 701
            .|:|                ....|...|  ..|....|.....|..:|.    :|         
Mouse   351 KKKRPMSQISGVKKLMHSSSLTNSCIPRFGVKTEQEDVLAKELEDVNKWG----LHVFRIAELSG 411

  Fly   702 ------LMQTMFVELGFIEKFSIPVDTLREWLYEVYKHYN-EVPFHNFRHCFCVAQMMYAITRQA 759
                  :|.|:|.|...::.|.||||||..:|..:..||: :|.:||..|...|.|..:.:....
Mouse   412 NRPLTVIMHTIFQERDLLKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTP 476

  Fly   760 NLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALRYNDISPLENHHCSIAFRLLEHP 824
            .|.:...|||.|..:.:...||:||||.:|.:.||..:||||.|||.|.|||||.::.|:||:..
Mouse   477 ALEAVFTDLEILAAIFASAIHDVDHPGVSNQFLINTNSELALMYNDSSVLENHHLAVGFKLLQEE 541

  Fly   825 ECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEITP-----------IFDYSNRAHI 878
            .|:||:|.::....::|:.:|..:|||||::|..:|.....:..           :.:||:|..:
Mouse   542 NCDIFQNLTKKQRQSLRKMVIDIVLATDMSKHMNLLADLKTMVETKKVTSSGVLLLDNYSDRIQV 606

  Fly   879 NLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVTPFMDPDKVSKPGSQVR 943
               ...::..||:||..:|:.:...|.||:::|||.|...|:..|:.::|..|....|...|||.
Mouse   607 ---LQNMVHCADLSNPTKPLQLYRQWTDRIMEEFFRQGDRERERGMEISPMCDKHNASVEKSQVG 668

  Fly   944 FIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRL--------------------------- 981
            ||..::.||:|...:||....:.|:..:....|:|:..                           
Mouse   669 FIDYIVHPLWETWADLVHPDAQDILDTLEDNREWYQSTIPQSPSPAPDDQEEGRQGQTEKFQFEL 733

  Fly   982 ---NDAQTKTRK----------SVADSNTSATSDSNSGTI 1008
               .|.::.|.|          |.:||.|..|.||.|..|
Mouse   734 TLEEDCESDTEKDSGSQVEEDTSCSDSKTLCTQDSESTEI 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 78/238 (33%)
Pde4dXP_006517706.1 PDE4_UCR 218..334 CDD:375549 31/172 (18%)
PDEase_I 456..697 CDD:365964 79/243 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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