DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and Pde6a

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_666198.1 Gene:Pde6a / 225600 MGIID:97524 Length:860 Species:Mus musculus


Alignment Length:468 Identity:119/468 - (25%)
Similarity:199/468 - (42%) Gaps:94/468 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   619 DDDFRALVKDLKRKVEYTERMNWLCLSKRPLGPPHRKSSLPKHQEVKRRFLEI------CDTTFS 677
            ||....|::.|      |:.:.|..|:      |....|:.|.:..|..|.:|      ||   :
Mouse   413 DDMDETLMESL------TQFLGWSVLN------PDTYESMNKLENRKDIFQDIVKYHVKCD---N 462

  Fly   678 EEVRAALR------------------------LPAFDSYE-----WSDADVIHLMQT-----MFV 708
            ||::..|:                        ||..:|||     :||..:..|...     |:.
Mouse   463 EEIQKILKTREVYGKEPWECEEEELAEILQGELPDAESYEINKFHFSDLPLTELELVKCGIQMYY 527

  Fly   709 ELGFIEKFSIPVDTLREWLYEVYKHYNEVPFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLIL 773
            ||..::||.||.:.|..::|.:.|.|..:.:||:||.|.|.|.|:::.....|.....|||.|.:
Mouse   528 ELRVVDKFHIPQEALVRFMYSLSKGYRRITYHNWRHGFNVGQTMFSLLVTGKLKRYFTDLEALAM 592

  Fly   774 LVSCICHDLDHPGYNNIYQINARTELALRYNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFN 838
            :.:..|||:||.|.||:||:.::..|| :.:..|.||.||......||.....|||:|.:|....
Mouse   593 VTAAFCHDIDHRGTNNLYQMKSQNPLA-KLHGSSILERHHLEFGKTLLRDESLNIFQNLNRRQHE 656

  Fly   839 NIREGIIRCILATDMARHNEILTQFMEITPIFDYS---------------NRAHINLLCMILIKV 888
            :....:...|:|||:|.:.:..|.|.:|.   |.|               .:....::..:::..
Mouse   657 HAIHMMDIAIIATDLALYFKKRTMFQKIV---DQSKTYESTQEWTQYMMLEQTRKEIVMAMMMTA 718

  Fly   889 ADISNEARPMDVAEPWLDRLLQEFFAQSAAEKS--EGLPVTPFMDPDKVSK-PGSQVRFIGLVLL 950
            .|:|...:|.:|.......:..||:.|...|::  :..|: |.||.:|..: |..||.||..|..
Mouse   719 CDLSAITKPWEVQSKVALLVAAEFWEQGDLERTVLQQNPI-PMMDRNKADELPKLQVGFIDFVCT 782

  Fly   951 PLFEALGELVPELTELI--IIPVR-----IALEYYRRLNDAQTKTRKSVADSNTSATSDSNSGTI 1008
            .:::.......|:|.::  |...|     :|.||..::...:.:.:|..| :..:|:.:...|. 
Mouse   783 FVYKEFSRFHEEITPMLDGITNNRKEWKALADEYEAKMKALEEEKQKQQA-AKQAASGNQPGGN- 845

  Fly  1009 DSNAAMVSTPGGA 1021
                   .|||||
Mouse   846 -------PTPGGA 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 68/245 (28%)
Pde6aNP_666198.1 GAF 67..232 CDD:214500
GAF 254..441 CDD:214500 9/39 (23%)
PDEase_I 558..802 CDD:278654 68/248 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.