DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and Pde8b

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_001360932.1 Gene:Pde8b / 218461 MGIID:2443999 Length:885 Species:Mus musculus


Alignment Length:919 Identity:196/919 - (21%)
Similarity:326/919 - (35%) Gaps:273/919 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 DTEDNEEEQEHPSEKPE--------RTDIEEEPPPAIAVTTTTTATVRRK-----SSSSSTISGT 347
            |..::..:....|:.|.        :||..:..||:.|........|||.     |.||:..||.
Mouse    21 DESNSPRQTSSVSQGPTAPLHGLFVQTDAADAMPPSRAAGPPGAVRVRRSRAELGSGSSTGSSGP 85

  Fly   348 ATVS-------GSVSVSASASQSFCS-NNINLLE-------------ELLIQFYEEQD------- 384
            ||.:       ...|..|....|:.| ..::..|             ::|:.|.:|..       
Mouse    86 ATTTCRGRRRHCCSSAEAETQTSYTSVKQVSSAEVRIGPMRLTQDPIQVLLIFAKEDSQSDGFWW 150

  Fly   385 ------HRSNLT---------VIRHHHHQQHQQHQQQQRITNNNNNNNNCNSIQNNNNMSNPAAT 434
                  :|.|:.         .:..||......|:|    :.|.:....|.||:..|...:....
Mouse   151 ACDRAGYRCNIARTPESALECFLDKHHEIIVIDHRQ----SRNFDAEAVCRSIRATNPSEHTVIL 211

  Fly   435 AAATATPSVEQPAT------SGTTNIHLQPTSL---------PDGSDNPRRRRASDCSAVQAALQ 484
            |..:......:.|:      :|.....::.:|:         .:..:...:.:...|::|..||.
Mouse   212 AVVSQASDDHEEASVLPLLHAGFNRRFMENSSIIACYNELIQIEHGEVRSQFKLRACNSVFTALD 276

  Fly   485 NQLHC------------ITLKNNNCGKAMPFHRGSCGAAGEHLLAANSIANRATIILSKSCSNVD 537
               ||            |...|....:.|.:|:|.        |....:|:     |.||..| .
Mouse   277 ---HCHEAIEITSDDHVIQYVNPAFERMMGYHKGE--------LLGKELAD-----LPKSDKN-R 324

  Fly   538 GDATATAATALSSTVGGGIGGI-------GGSIKMRASATDIETNALNGARDAIVASNNGNNGNN 595
            .|...|..|.:..  |....|:       |.||:.....|.:                      .
Mouse   325 ADLLDTINTCIKK--GKEWQGVYYARRKSGDSIQQHVKITPV----------------------I 365

  Fly   596 GNNGNNEY--SILQL------NNTIIQCHFND-DDFRALVKDLKRKVEYTERMNWLCLSKRPLGP 651
            |..|...:  |:.:|      |..|.:.|.:. |:.:......:.|....|.::...:|.|....
Mouse   366 GQGGKIRHFVSLKKLCCTTDSNKQIHRIHRDSGDNSQTEPHSFRHKSRRKESIDVKSISSRGSDA 430

  Fly   652 P----HRKSSLPK-HQ--------------------------EVKRRFLEICDTT---------- 675
            |    .|..|:.: |.                          |...|.|||..||          
Mouse   431 PSLQNRRYPSMARIHSMTIEAPITKVINIINAAQENSPVTVAEALDRVLEILRTTELYSPQLGTK 495

  Fly   676 ---------------------------FSEEV---RAALRLP------------AFDSYEWSDAD 698
                                       |::.|   .:.|.:|            ..|:.|..|.:
Mouse   496 DEDPHTSDLVGGLMTDGLRRLSGNEYVFTKNVHHSHSHLSMPITINDVPPSIAQLLDNEESWDFN 560

  Fly   699 V------------IHLMQTMFVELGFIEKFSIPVDTLREWLYEVYKHYNEV-PFHNFRHCFCVAQ 750
            :            ::|...:|...|..|..:....|||.||..:..:|:.. .:||..|...|..
Mouse   561 IFELEAVTHKRPLVYLGLKVFSRFGVCEFLNCTETTLRAWLQVIEANYHSSNAYHNSTHAADVLH 625

  Fly   751 MMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALRYNDISPLENHHCS 815
            .......:..:...|..|:.:..|::...||:||||..|.:..||.:|||:.|||.:.||:||.:
Mouse   626 ATAFFLGKERVKGSLDQLDEVAALIAATVHDVDHPGRTNSFLCNAGSELAVLYNDTAVLESHHTA 690

  Fly   816 IAFRL-LEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFM--------------- 864
            :||:| ::..:||||||..|:.:..:|:.||..:|||:|.:|.|.:.:|:               
Mouse   691 LAFQLTVKDTKCNIFKNIDRNHYRTLRQAIIDMVLATEMTKHFEHVNKFVNSINKPLAAESEGSD 755

  Fly   865 -EITPIFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVT- 927
             |..|.........| |:..::||.||::|..||:|:...|..|:.:|:|||:..||.:||||. 
Mouse   756 CECNPTGKNFPENQI-LIKRMMIKCADVANPCRPLDLCIEWAGRISEEYFAQTDEEKRQGLPVVM 819

  Fly   928 PFMDPDKVSKPGSQVRFIGLVLLPLFEA------LGELVPELTELIIIPVRIALEYYRRLNDAQT 986
            |..|.:..|.|.||:.||...:..:|:|      |..|:..|.:        ..::::.|:|.:.
Mouse   820 PVFDRNTCSIPKSQISFIDYFITDMFDAWDAFAHLPALMQHLAD--------NYKHWKTLDDLKC 876

  Fly   987 KTRKSVADS 995
            ||.:..:||
Mouse   877 KTLRLPSDS 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 83/251 (33%)
Pde8bNP_001360932.1 PDE8 1..47 CDD:285793 3/25 (12%)
PAS 167..375 CDD:225112 41/252 (16%)
PAS_9 280..377 CDD:379177 22/134 (16%)
PDEase_I 614..861 CDD:365964 82/247 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2223
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.950

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