DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and Pde2a

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_006507586.1 Gene:Pde2a / 207728 MGIID:2446107 Length:953 Species:Mus musculus


Alignment Length:636 Identity:146/636 - (22%)
Similarity:240/636 - (37%) Gaps:157/636 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   379 FYEEQDHRSNLTVIRHHHHQ---------QHQQHQQ--------------------------QQR 408
            |.:|.:|     ||:|..|.         ..|:.|:                          |:.
Mouse   371 FTDEDEH-----VIQHCFHYTGTVLTSTLAFQKEQKLKCECQALLQVAKNLFTHLDDVSVLLQEI 430

  Fly   409 ITNNNNNNNN--CN-SIQNNNNMSNPAATAAATATPSVE--QPATSGTTNIHLQPT----SLPDG 464
            ||...|.:|.  |: .:.:.|.:.............|.|  .||..|... |:..|    ::||.
Mouse   431 ITEARNLSNAEICSVFLLDQNELVAKVFDGGVVDDESYEIRIPADQGIAG-HVATTGQILNIPDA 494

  Fly   465 SDNPRRRRASDCSAVQAALQNQLHCITLKNNNCGKAMPFHRGSCGAAGEHLLAANSIANRATIIL 529
            ..:|...|..|.|.  ......:.|..:||.|                :.::....:.|:   |.
Mouse   495 YAHPLFYRGVDDST--GFRTRNILCFPIKNEN----------------QEVIGVAELVNK---IN 538

  Fly   530 SKSCSNVDGDATATAATALSSTVGGGIGGIGGSIKMRASATDIETNALNGARDAIVASNNGNNGN 594
            ....|..|.|    .|||.|...|..|            |..:....:|.|              
Mouse   539 GPWFSKFDED----LATAFSIYCGISI------------AHSLLYKKVNEA-------------- 573

  Fly   595 NGNNGNNEYSILQLNNTIIQCHF--NDDDFRALVKDLKRKVEYTERMNWLCLSKRPLGPPHRKSS 657
                   :|. ..|.|.::..|.  :||::..|:.|                ..:|:.       
Mouse   574 -------QYR-SHLANEMMMYHMKVSDDEYTKLLHD----------------GIQPVA------- 607

  Fly   658 LPKHQEVKRRFLEICDTTFSEEVRAALRLPAFDSYEWSDADVIHLMQTMFVELGFIEKFSIPVDT 722
                         ..|:.|:........||        :.|....:.:|..::.||..:.|...|
Mouse   608 -------------AIDSNFANFTYTPRSLP--------EDDTSMAILSMLQDMNFINNYKIDCPT 651

  Fly   723 LREWLYEVYKHYNEVPFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGY 787
            |..:...|.|.|.:.|:||:.|.|.|:...|.:.:...|.:.|.|:|...|.:||:||||||.|.
Mouse   652 LARFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKNLELSNYLEDIEIFALFISCMCHDLDHRGT 716

  Fly   788 NNIYQINARTELALRY-NDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILAT 851
            ||.:|:.:::.||..| ::.|.:|.||.:.|..:|....||||.:|||..:..:.:.:...||||
Mouse   717 NNSFQVASKSVLAALYSSEGSVMERHHFAQAIAILNTHGCNIFDHFSRKDYQRMLDLMRDIILAT 781

  Fly   852 DMARHNEILTQFMEITPI-FDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQ 915
            |:|.|..|.....::..: :|.:||.|..||..:|:...|:|::.:.........:.:.:|||:|
Mouse   782 DLAHHLRIFKDLQKMAEVGYDRNNRQHHRLLLCLLMTSCDLSDQTKGWKTTRKIAELIYKEFFSQ 846

  Fly   916 SAAEKSEGLPVTPFMDPDKVSKPGSQVRFIGLVLLPLFEALGELVPELTEL 966
            ...||:.|......||.:|...|..|:.|:..:.:|:::.|.:|.|:..||
Mouse   847 GDLEKAMGNRPMEMMDREKAYIPELQISFMEHIAMPIYKLLQDLFPKAAEL 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 75/230 (33%)
Pde2aXP_006507586.1 GAF 253..400 CDD:214500 8/33 (24%)
GAF 422..571 CDD:214500 36/186 (19%)
PDEase_I 668..901 CDD:365964 75/230 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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