DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and Pde9a

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_612552.1 Gene:Pde9a / 191569 RGDID:621035 Length:534 Species:Rattus norvegicus


Alignment Length:394 Identity:185/394 - (46%)
Similarity:246/394 - (62%) Gaps:24/394 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   628 DLKRKVE----YTERMNWLC----LSKRPLGPPHRKSSLPKHQEVKRRFLEICDTTFSEEVRAAL 684
            |:|:..|    ...|.|..|    |..:.|.|.....:.||:             ..|.|...||
  Rat   144 DIKKMREELAARNNRTNCPCKYSFLDNKKLTPRRDVPTYPKY-------------LLSPETIEAL 195

  Fly   685 RLPAFDSYEWSDADVIHLMQTMFVELGFIEKFSIPVDTLREWLYEVYKHYNEVPFHNFRHCFCVA 749
            |.|.||.:.|...:::..::.|:.:||.:..|||...|||.||..|:.:|...|||||||||||.
  Rat   196 RKPTFDVWLWEPNEMLSCLEHMYHDLGLVRDFSINPITLRRWLLCVHDNYRSNPFHNFRHCFCVT 260

  Fly   750 QMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALRYNDISPLENHHC 814
            ||||::.....|..:...::.|:|:.:.||||||||||||.||||||||||:|||||||||||||
  Rat   261 QMMYSMVWLCGLQEKFSQMDILVLMTAAICHDLDHPGYNNTYQINARTELAVRYNDISPLENHHC 325

  Fly   815 SIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEITPIFDYSNRAHIN 879
            :|||::|..||||||.:...:.|..||:|:|..|||||||||.||:..|.|....|||||..|:.
  Rat   326 AIAFQILARPECNIFASVPPEGFRQIRQGMITLILATDMARHAEIMDSFKEKMENFDYSNEEHLT 390

  Fly   880 LLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVTPFMDPDKVSKPGSQVRF 944
            ||.|||||..|||||.|||:|||||:|.||:|:|.||..||||||||.||||.|||:|..:|:.|
  Rat   391 LLKMILIKCCDISNEVRPMEVAEPWVDCLLEEYFMQSDREKSEGLPVAPFMDRDKVTKATAQIGF 455

  Fly   945 IGLVLLPLFEALGELVPELTELIIIPVRIALEYY---RRLNDAQTKTRKSVADSNTSATSDSNSG 1006
            |..||:|:||.:.:|.|.:.|.::.|:..:.|:|   ::|:||..:.:|...:..:.||.::...
  Rat   456 IKFVLIPMFETVTKLFPIVEETMLRPLWESREHYEELKQLDDAMKELQKKTENLTSGATENAPEK 520

  Fly  1007 TIDS 1010
            |.|:
  Rat   521 TRDA 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 140/227 (62%)
Pde9aNP_612552.1 PDEase_I 250..478 CDD:278654 140/227 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..534 5/25 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 296 1.000 Domainoid score I1422
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 1 1.000 - - FOG0004612
OrthoInspector 1 1.000 - - oto96823
orthoMCL 1 0.900 - - OOG6_103870
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3819
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.720

Return to query results.
Submit another query.