DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and Pde1b

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_032826.1 Gene:Pde1b / 18574 MGIID:97523 Length:535 Species:Mus musculus


Alignment Length:507 Identity:124/507 - (24%)
Similarity:199/507 - (39%) Gaps:115/507 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   603 YSILQLNNTIIQCHFNDDDFRALVKDLKRKVEYT------------------------------- 636
            |.:.||.|..:.           :::||:.:|||                               
Mouse    40 YMVKQLENGEVN-----------IEELKKNLEYTASLLEAVYIDETRQILDTEDELRELRSDAVP 93

  Fly   637 -ERMNWLC--LSKRPLGPPHRKSSLPKHQEVK-------------RRFLEICDTTFSEEVRAALR 685
             |..:||.  .:::......|....||.:.:.             ||.......|:|..|...|:
Mouse    94 SEVRDWLASTFTQQTRAKGRRAEEKPKFRSIVHAVQAGIFVERMFRRTYTSVGPTYSTAVHNCLK 158

  Fly   686 ---LPAFDSYEWSDADVIHLMQTMFVEL----GFIEKFSIPVDTLREWL------YEVYKHYNEV 737
               |..||.:..:.|...|.::|:..||    ..|.:|.||...|..:|      |..||:    
Mouse   159 NLDLWCFDVFSLNRAADDHALRTIVFELLTRHSLISRFKIPTVFLMSFLEALETGYGKYKN---- 219

  Fly   738 PFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALR 802
            |:||..|...|.|.::....:..::..|.::|.|.::.:...||.:|.|..|.:.|..::|.|:.
Mouse   220 PYHNQIHAADVTQTVHCFLLRTGMVHCLSEIEVLAIIFAAAIHDYEHTGTTNSFHIQTKSECAIL 284

  Fly   803 YNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEIT 867
            |||.|.|||||.|..||:::..|.|||.|.::|.|..:|..:|..:|||||:.|   ..|...:.
Mouse   285 YNDRSVLENHHISSVFRMMQDDEMNIFINLTKDEFAELRALVIEMVLATDMSCH---FQQVKTMK 346

  Fly   868 PIFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVTPFMDP 932
            .......|...:....:|:..||||:..:...|...|...|::|||.|...|...|||.:|..|.
Mouse   347 TALQQLERIDKSKALSLLLHAADISHPTKQWSVHSRWTKALMEEFFRQGDKEAELGLPFSPLCDR 411

  Fly   933 DKVSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRLNDAQTKTRKS------ 991
            .......||:.||..::.|.|..|    .::.|..:.|:..        :|::.|::.|      
Mouse   412 TSTLVAQSQIGFIDFIVEPTFSVL----TDVAEKSVQPLAD--------DDSKPKSQPSFQWRQP 464

  Fly   992 -----VADSNTSATS---------DSNSGTIDSNAAMVSTPGGASDKLSLDK 1029
                 |.|.|....|         ..|.......||     .|.::::|:|:
Mouse   465 SLDVDVGDPNPDVVSFRATWTKYIQENKQKWKERAA-----SGITNQMSIDE 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 71/227 (31%)
Pde1bNP_032826.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Calmodulin-binding. /evidence=ECO:0000255 27..47 3/6 (50%)
PDEase_I_N 80..136 CDD:285672 6/55 (11%)
PDEase_I 221..448 CDD:278654 72/233 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..474 6/37 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 495..535 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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