DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and Pde1a

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_001153054.1 Gene:Pde1a / 18573 MGIID:1201792 Length:545 Species:Mus musculus


Alignment Length:480 Identity:127/480 - (26%)
Similarity:204/480 - (42%) Gaps:97/480 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   599 GNNEYSILQLNNTIIQCHFNDDD----------FRALVK----------DLKRKVEY-------- 635
            |:.:..|.:|.|...:....:..          .|.|||          |||:.:||        
Mouse     2 GSTDTDIEELENATYKYLIGEQTEKMWQRLKGILRCLVKQLEKGDVNVVDLKKNIEYAASVLEAV 66

  Fly   636 ----TERM--------------------NWLC---------LSKRPLGPPHRKSSLPKHQ----- 662
                |.|:                    :||.         :.|:|...|..:|.:...|     
Mouse    67 YIDETRRLLDTEDELSDIQTDSVPSEVRDWLASTFTRKMGMMKKKPEEKPKFRSIVHAVQAGIFV 131

  Fly   663 -EVKRRFLEICDTTFSEEVRAALRLP---AFDSYEWSDADVIHLMQTMFVEL----GFIEKFSIP 719
             .:.|:...:...|:...|...|:..   :||.:..::|...|.::.|..||    ..|.:|.||
Mouse   132 ERMYRKNYHMVGLTYPAAVIVTLKEVDKWSFDVFALNEASGEHSLKFMIYELFTRYDLINRFKIP 196

  Fly   720 VDTL---REWLYEVY-KHYNEVPFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICH 780
            |..|   .|.|...| ||.|  |:||..|...|.|.::.|.....::..|.:||.|.::.:...|
Mouse   197 VSCLIAFAEALEVGYSKHKN--PYHNLVHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIH 259

  Fly   781 DLDHPGYNNIYQINARTELALRYNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGII 845
            |.:|.|..|.:.|..|:::|:.|||.|.|||||.|.|:||::..|.||..|.|:|.:.::|..:|
Mouse   260 DYEHTGTTNNFHIQTRSDVAILYNDRSVLENHHVSAAYRLMQEEEMNILVNLSKDDWRDLRNLVI 324

  Fly   846 RCILATDMARHNEILTQFMEITPIFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQ 910
            ..:|||||:.|.:.:..........:..:||.   ...:::..||||:.|:...:...|...|::
Mouse   325 EMVLATDMSGHFQQIKNIRNSLQQPEGIDRAK---TMSLILHAADISHPAKTWKLHYRWTMALME 386

  Fly   911 EFFAQSAAEKSEGLPVTPFMDPDKVSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIAL 975
            |||.|...|...|||.:|..|........||:.||..::.|.|    .|:.:.||.|:||     
Mouse   387 EFFLQGDKEAELGLPFSPLCDRKSTMVAQSQIGFIDFIVEPTF----SLLTDSTEKIVIP----- 442

  Fly   976 EYYRRLNDAQTKTRKSVADSNTSAT 1000
                 |.:..:|::.|...:::|:|
Mouse   443 -----LIEEASKSQSSNYGASSSST 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 73/227 (32%)
Pde1aNP_001153054.1 Calmodulin-binding 24..44 4/19 (21%)
PDEase_I_N 77..133 CDD:369905 7/55 (13%)
PDEase_I 218..434 CDD:365964 71/222 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..545
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.