DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde9 and pde-3

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_001293571.1 Gene:pde-3 / 183981 WormBaseID:WBGene00008443 Length:693 Species:Caenorhabditis elegans


Alignment Length:716 Identity:162/716 - (22%)
Similarity:265/716 - (37%) Gaps:159/716 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 HHHQQHQQHQQQQRITNNNNNNNNCNSIQNNNNMSNPAATAAATATPSVEQPATSGTTNI----- 454
            |.:.||..||.......:.:...:....:|.:.    |.::.|::..|::|...|.|.|.     
 Worm    28 HQYFQHHYHQTPPGKLRDRSPRLSAEMRKNRDT----ATSSPASSGVSIQQRRGSTTQNSGVGSI 88

  Fly   455 ----------------HLQ----------PTSLPDG--SDNPRRRRASDCSAVQAALQNQLHCIT 491
                            |:|          .||||..  |.|..:...|..|..:..:.:.|    
 Worm    89 GLPVLGGRGRGVMSDGHMQRTFHEAMRQRRTSLPANSLSLNGAKVTGSSLSEAKGLIADML---- 149

  Fly   492 LKNNNCGKAMPFHRGSCGAAGEHLLAANSIANRATIILSKSCSNVDGDATATAATALSSTVGGGI 556
                 ..|.:|.:..||..|             .|::|.:....::|........::.....||.
 Worm   150 -----MNKELPGNVASCLRA-------------VTMLLEQRPLPLNGLLNDFGLPSVVENPYGGE 196

  Fly   557 GGIGGSIKMR---------ASATDIETNAL--NGARDAIVASNNGNNGNNGNNGNNEYSILQLNN 610
            ..:.|:.|.|         .|||.:.|...  |.||.:.......:..|     |||:      .
 Worm   197 SMVVGASKPRISNITFSTVTSATGLPTVPAEPNKARSSSYWKTEASPSN-----NNEH------E 250

  Fly   611 TIIQCHFNDDDFRALVKDLKRKVEYTERMNWLCLSKRPLGPPHRKSSLP--KHQEVKRRFLEICD 673
            |.:              ||.||:.         :|::..| .|..:.:.  ..|....|.|: .|
 Worm   251 TPV--------------DLLRKIS---------VSRKESG-THVDTVVTTIDGQRYDTRELD-TD 290

  Fly   674 TTFSEEVRAALRLPAFD-SYEWSDADVIHLMQTMFVELGFIEKFSIPVDTLREWLYEVYKHYNEV 737
            ...:|  .|....|.|. |.:.....:..|...:|.:......|.:.......:.:.:.|.|.|:
 Worm   291 PDLAE--TAVWSFPIFQMSRKHPQTILSRLTYNIFQQAELFRIFKVSPIKFFNFFHALEKGYWEI 353

  Fly   738 PFHNFRHCFCVAQMMYAIT-------------------------RQANLLSRLGDLECLILLVSC 777
            |:||..|...|....|.::                         :.::::|:|..||.:.|..:.
 Worm   354 PYHNRIHAADVLHGCYYLSAHPVRSTFLTPKTPDSVLTPPHPHHQHSSIMSQLSTLELMALFTAA 418

  Fly   778 ICHDLDHPGYNNIYQINARTELALRYNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIRE 842
            ..||.||||..|.:.:....:.|:.|||.|.|||||.:.:::||..||.:..:|.........|.
 Worm   419 AMHDYDHPGRTNAFLVQVEDKKAILYNDRSVLENHHAAESWKLLNKPENHFIENLDPAEMKRFRY 483

  Fly   843 GIIRCILATDMARHNEILTQFMEITPIFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDR 907
            .::..|||||:.:|.||:..|.|.....|........|:..:|||:|||::..:|..:...|.||
 Worm   484 LVLEYILATDLKQHFEIIMTFTERLTEIDVQVETDRLLIGKLLIKMADINSPTKPYGLHRQWTDR 548

  Fly   908 LLQEFFAQSAAEKSEGLPVTPFMDPDKVSKPGSQVRFIGLVLLPLFEALGE--LVPELTELIIIP 970
            :.:||:.|...|:..|||:||:||.........|..||..|:.||..|:.|  |:|.|..|....
 Worm   549 ICEEFYEQGDDERRRGLPITPYMDRGDAQVAKLQDSFIAHVVSPLATAMNECGLLPILPGLDTSE 613

  Fly   971 VRIALEYYRRLNDAQTKTR-----------------KSVADSNTSATSDS----NSGTIDSNAAM 1014
            :.|.:|:..|....|.:..                 ..|.:..:::||||    ....:||:.:.
 Worm   614 LIINMEHNHRKWKEQIELENGGSYEAQITCNGGTAVNGVIEEESASTSDSPDPRRDSPLDSDLSQ 678

  Fly  1015 V 1015
            |
 Worm   679 V 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 77/254 (30%)
pde-3NP_001293571.1 PDEase_I 355..610 CDD:278654 77/254 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163379
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

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