DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde9 and pde-4

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_871945.1 Gene:pde-4 / 174235 WormBaseID:WBGene00020114 Length:674 Species:Caenorhabditis elegans


Alignment Length:777 Identity:164/777 - (21%)
Similarity:292/777 - (37%) Gaps:224/777 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 RRKSSSSSTISGTATVSGSVSVSASASQSFCSNNINLLEELLIQFYEEQDHRSNLTVIRHHHHQQ 399
            ||.|||||:.:|.:...|....|            :|..||                   |.|  
 Worm     4 RRGSSSSSSAAGGSGGGGGFGFS------------SLRREL-------------------HLH-- 35

  Fly   400 HQQHQQQQRITNNNNNNNNCNSIQNNNNMSNPAATAAATATPSVEQPATSGTTNIHLQPTSLPDG 464
                                    |....|:|:|::.:...|:...|.||..|        :| |
 Worm    36 ------------------------NFFRTSSPSASSTSRTPPAALPPRTSAVT--------IP-G 67

  Fly   465 SDNPRRRRASDCSAVQAALQNQLHCITLKNNNCGKAMPFHRGSCGAAGEHLL--AANSIANRATI 527
            |::   :..|..|:.....:     :|:...:.|.|    ..:.|..|.||.  .::|:..|...
 Worm    68 SNH---KLTSSASSYHPPRE-----LTVSTFSAGSA----TAADGLGGAHLTPSLSSSVHARRES 120

  Fly   528 ILSKSCSNVDGDATATAATALSSTVGGGIGGIGGSI------KMRASATDIETNALNGARDAIVA 586
            .|.::..:: .:|::....:.:|::.....|.|..:      ::.||..::.:|        :::
 Worm   121 FLYRASDDL-REASSLRPVSRASSIASNEHGHGDDLIVTPFAQLLASLRNVRSN--------LIS 176

  Fly   587 SNNGNNGNNGNNGNNE-----YSILQLNNTIIQC-HFNDDDFRALVKDLKRKVEYTERMNWLCLS 645
            ..|..|.::..:.|..     ...::|.:.::.| |                 :..|.::| ||.
 Worm   177 ITNIQNSDDSRHANRSAKRPPLHNIELPDDVVHCAH-----------------DTLEELDW-CLD 223

  Fly   646 KRPLGPPHRKSSLPKHQEVKR-------RFLE----------ICDTTFSE--------------E 679
            :......||..|.....:.::       .|.|          ...||:.:              |
 Worm   224 QLETIQTHRSVSEMASSKFRKMLNKELSHFAESSKSGTQVSKFLITTYMDKEEDEPSIEIEVPTE 288

  Fly   680 VRA---------------------------ALRLPAFDSY--------------------EWSDA 697
            |:.                           .||.|:.|.:                    :|. .
 Worm   289 VQGPSTSGPMTLSILKKAQTAAMNKISGVRKLRAPSHDGHVPEYGVNCAREIAVHMQRLDDWG-P 352

  Fly   698 DVIHLMQ------------TMFVELGFIEKFSIPVDTLREWLYEVYKHYNEVPFHNFRHCFCVAQ 750
            ||..:.:            ::..:....:.|.|...||..:|..:..||....:|||.|...|||
 Worm   353 DVFKIDELSKNHSLTVVTFSLLRQRNLFKTFEIHQSTLVTYLLNLEHHYRNNHYHNFIHAADVAQ 417

  Fly   751 MMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALRYNDISPLENHHCS 815
            .|:.:.....|.....|||.|..:.:...||:||||:.|.|.||:..|||:.|||.|.||.||.:
 Worm   418 SMHVLLMSPVLTEVFTDLEVLAAIFAGAVHDVDHPGFTNQYLINSNNELAIMYNDESVLEQHHLA 482

  Fly   816 IAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEITP----------IF 870
            :||:||:...|:...|.||......|:.:|..:|||||::|..:|.....:..          :.
 Worm   483 VAFKLLQDSNCDFLANLSRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKKVAGNNVIVL 547

  Fly   871 D-YSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVTPFMDPDK 934
            | |:::..:   ...:|.:||:||..:|:::.:.|..|:::|::.|...||..||.::|..|...
 Worm   548 DKYNDKIQV---LQSMIHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEKELGLEISPMCDRGN 609

  Fly   935 VSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRLNDAQTKTRKSVADSN 996
            |:...|||.||..::.||:|...:||....:.|:..:....|:|:.....:..|.::|.:.:
 Worm   610 VTIEKSQVGFIDYIVHPLYETWADLVYPDAQNILDQLEENREWYQSRIPEEPDTARTVTEDD 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 80/238 (34%)
pde-4NP_871945.1 PDEase_I 406..647 CDD:278654 81/243 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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