DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde9 and pde-4

DIOPT Version :10

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_871945.1 Gene:pde-4 / 174235 WormBaseID:WBGene00020114 Length:674 Species:Caenorhabditis elegans


Alignment Length:777 Identity:164/777 - (21%)
Similarity:292/777 - (37%) Gaps:224/777 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 RRKSSSSSTISGTATVSGSVSVSASASQSFCSNNINLLEELLIQFYEEQDHRSNLTVIRHHHHQQ 399
            ||.|||||:.:|.:...|....|            :|..||                   |.|  
 Worm     4 RRGSSSSSSAAGGSGGGGGFGFS------------SLRREL-------------------HLH-- 35

  Fly   400 HQQHQQQQRITNNNNNNNNCNSIQNNNNMSNPAATAAATATPSVEQPATSGTTNIHLQPTSLPDG 464
                                    |....|:|:|::.:...|:...|.||..|        :| |
 Worm    36 ------------------------NFFRTSSPSASSTSRTPPAALPPRTSAVT--------IP-G 67

  Fly   465 SDNPRRRRASDCSAVQAALQNQLHCITLKNNNCGKAMPFHRGSCGAAGEHLL--AANSIANRATI 527
            |::   :..|..|:.....:     :|:...:.|.|    ..:.|..|.||.  .::|:..|...
 Worm    68 SNH---KLTSSASSYHPPRE-----LTVSTFSAGSA----TAADGLGGAHLTPSLSSSVHARRES 120

  Fly   528 ILSKSCSNVDGDATATAATALSSTVGGGIGGIGGSI------KMRASATDIETNALNGARDAIVA 586
            .|.::..:: .:|::....:.:|::.....|.|..:      ::.||..::.:|        :::
 Worm   121 FLYRASDDL-REASSLRPVSRASSIASNEHGHGDDLIVTPFAQLLASLRNVRSN--------LIS 176

  Fly   587 SNNGNNGNNGNNGNNE-----YSILQLNNTIIQC-HFNDDDFRALVKDLKRKVEYTERMNWLCLS 645
            ..|..|.::..:.|..     ...::|.:.::.| |                 :..|.::| ||.
 Worm   177 ITNIQNSDDSRHANRSAKRPPLHNIELPDDVVHCAH-----------------DTLEELDW-CLD 223

  Fly   646 KRPLGPPHRKSSLPKHQEVKR-------RFLE----------ICDTTFSE--------------E 679
            :......||..|.....:.::       .|.|          ...||:.:              |
 Worm   224 QLETIQTHRSVSEMASSKFRKMLNKELSHFAESSKSGTQVSKFLITTYMDKEEDEPSIEIEVPTE 288

  Fly   680 VRA---------------------------ALRLPAFDSY--------------------EWSDA 697
            |:.                           .||.|:.|.:                    :|. .
 Worm   289 VQGPSTSGPMTLSILKKAQTAAMNKISGVRKLRAPSHDGHVPEYGVNCAREIAVHMQRLDDWG-P 352

  Fly   698 DVIHLMQ------------TMFVELGFIEKFSIPVDTLREWLYEVYKHYNEVPFHNFRHCFCVAQ 750
            ||..:.:            ::..:....:.|.|...||..:|..:..||....:|||.|...|||
 Worm   353 DVFKIDELSKNHSLTVVTFSLLRQRNLFKTFEIHQSTLVTYLLNLEHHYRNNHYHNFIHAADVAQ 417

  Fly   751 MMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALRYNDISPLENHHCS 815
            .|:.:.....|.....|||.|..:.:...||:||||:.|.|.||:..|||:.|||.|.||.||.:
 Worm   418 SMHVLLMSPVLTEVFTDLEVLAAIFAGAVHDVDHPGFTNQYLINSNNELAIMYNDESVLEQHHLA 482

  Fly   816 IAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEITP----------IF 870
            :||:||:...|:...|.||......|:.:|..:|||||::|..:|.....:..          :.
 Worm   483 VAFKLLQDSNCDFLANLSRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKKVAGNNVIVL 547

  Fly   871 D-YSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVTPFMDPDK 934
            | |:::..:   ...:|.:||:||..:|:::.:.|..|:::|::.|...||..||.::|..|...
 Worm   548 DKYNDKIQV---LQSMIHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEKELGLEISPMCDRGN 609

  Fly   935 VSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRLNDAQTKTRKSVADSN 996
            |:...|||.||..::.||:|...:||....:.|:..:....|:|:.....:..|.::|.:.:
 Worm   610 VTIEKSQVGFIDYIVHPLYETWADLVYPDAQNILDQLEENREWYQSRIPEEPDTARTVTEDD 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:459723 80/238 (34%)
pde-4NP_871945.1 PDE4_UCR 157..273 CDD:465648 20/141 (14%)
PDEase_I 406..646 CDD:459723 81/242 (33%)

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