DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde9 and pde-1

DIOPT Version :10

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_493343.1 Gene:pde-1 / 173200 WormBaseID:WBGene00011433 Length:664 Species:Caenorhabditis elegans


Alignment Length:668 Identity:165/668 - (24%)
Similarity:268/668 - (40%) Gaps:186/668 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 RRRRASDCSAVQAALQNQLHCITLKNNNCGKAMPFHRGSCGAAGEHLLAANSI---------ANR 524
            |.|:.|.|...::|.     |: ||.:. ..|...|    |.:.:.||:...|         ::|
 Worm     3 RARKTSSCGCFRSAF-----CL-LKPST-SSASEEH----GDSDKKLLSVQLITPRDEEEQTSSR 56

  Fly   525 ATIILSKSCSNVDGDATATAATALS---STVGGGIGGIGGSIKMRASATDIETNALNGARDAIVA 586
            :..|.....:.:|....|.||....   ::.|||:.|.|...::          .|:|.:..:..
 Worm    57 SIKIPPLDLNGLDCKKNAVAARRAGRRRTSEGGGVRGKGHFAEV----------VLDGLQRPVSL 111

  Fly   587 SNNGNNGNNGNNGNNE---------------------------YSILQLNNTIIQCHFNDDDFRA 624
            ..|....:|.::...|                           |.:.|||:..:.          
 Worm   112 LRNQKEKSNSDDNCQEKEPTSPSSSRKKSYDNAPALESLEKLRYILHQLNSGQLP---------- 166

  Fly   625 LVKDLKRKVEY------------TERM--------------------NWLC--LSKRPLGPPHRK 655
             ::||||.:||            |.|:                    .||.  .:::..|   :|
 Worm   167 -LEDLKRNIEYAALVLETAYMDETRRICDEDDDLAEVTPETVPDEVREWLAATFTRQNAG---KK 227

  Fly   656 SSLPKHQ----------------------------EVKRRFLEICDTTFS----EEVRA--ALRL 686
            ...||.:                            |:.....|:|..:||    .||..  ||:.
 Worm   228 RDKPKFKSVANAIRTGIFFEKLFRKQQVVQCPIPPEIAELMKEVCTWSFSPFQLNEVSEGHALKY 292

  Fly   687 PAFDSYEWSDADVIHLMQTMFVELGFIEKFSIPVDTLREWL--YEV-YKHYNEVPFHNFRHCFCV 748
            ..|:               :|...||:::|.:|:..|..:|  .|| |..:|. |:||..|...|
 Worm   293 VGFE---------------LFNRYGFMDRFKVPLTALENYLSALEVGYSKHNN-PYHNVVHAADV 341

  Fly   749 AQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALRYNDISPLENHH 813
            .|..:.:..|..|.:.|||||.|.:|...:.||.:|.|:.|.:.|.::::.|:.|||.|.|||||
 Worm   342 TQSSHFMLSQTGLANSLGDLELLAVLFGALIHDYEHTGHTNNFHIQSQSQFAMLYNDRSVLENHH 406

  Fly   814 CSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEITPIFDY------ 872
            .|..|||::..:.||..:.:||.:..:|..:|..:|||||:.|      ||:|..:...      
 Worm   407 VSSCFRLMKEDDKNILTHLTRDEYKELRNMVIEIVLATDMSTH------FMQIKTMKSMLSLPEG 465

  Fly   873 --SNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVTPFMDPDKV 935
              .|:|    ||:| :...|||:.|:|.::.|.|.:.:|:|||.|...|.|.|||.:|..|...|
 Worm   466 IDKNKA----LCLI-VHACDISHPAKPWNLHERWTEGVLEEFFRQGDLEASMGLPYSPLCDRHTV 525

  Fly   936 SKPGSQVRFIGLVLLPLFEALGELVPELTE-LIIIPVRIALEYYRRLNDAQTKTRKS----VADS 995
            ....||:.||..::.|.....|||:.::.| |:.:|...:| :...::....|:..:    :.|.
 Worm   526 HVADSQIGFIDFIVEPTMVVCGELLVKMVEPLVSLPPTDSL-FPPSVDGGDDKSPSNALSPLPDL 589

  Fly   996 NTSATSDSNSGTIDSNAA 1013
            ..|:||.|:...|..|.|
 Worm   590 RNSSTSPSSIRRIPLNYA 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:459723 83/236 (35%)
pde-1NP_493343.1 PDEase_I_N 191..248 CDD:462497 7/59 (12%)
PDEase_I 332..560 CDD:459723 84/238 (35%)

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