DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and pde3a

DIOPT Version :10

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_031753954.1 Gene:pde3a / 101730602 XenbaseID:XB-GENE-6033578 Length:1022 Species:Xenopus tropicalis


Alignment Length:790 Identity:166/790 - (21%)
Similarity:282/790 - (35%) Gaps:209/790 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 EQEHPSEKPERTDIEEEPPPAIAVTTTTTATVRRKSS---SSSTISGTATV---------SGSVS 355
            :.|..||:.|:..|     |.....:..|..:||.||   ::::.:|..|:         |||:.
 Frog   290 DSEEGSERGEKLTI-----PKRLRKSLPTGLLRRVSSTWTTTTSATGLPTLEPAPVRRDRSGSIK 349

  Fly   356 VSASASQSFCSNNINLLEELLIQFYEEQDHRSNLTVIRHHHHQQHQQHQQQQRITNNNNNNNNCN 420
            ...|:|.   ||..:....||::........:|         ..|...:.:|.|..|        
 Frog   350 PLDSSSS---SNPDSWHNSLLLKSRPFSPSLAN---------TNHVTPKWRQGIPPN-------- 394

  Fly   421 SIQNNNNMSNPAATAAATATPSVEQPATSGTTNIHLQPTSLPDGSD------NPRRRRASDCSAV 479
                    .:|..:...:..|..  ||.|.|  :...|....||::      ||.:..:|..||.
 Frog   395 --------ISPLISPCQSPIPGT--PAASPT--VKSLPVQFCDGTELGRLGPNPHKVLSSTKSAP 447

  Fly   480 QAALQNQLHCITLKNNNCGKAMPFHRGSCGAAGEHLLAANSIANRATIILSKSCSNVDGDATATA 544
            :  :.......||...:||::......|.||     |....:.:........:.:..|.|:|...
 Frog   448 E--IPEPFPGSTLVCASCGRSYSPVNPSDGA-----LDPGEVPHSQNRTDDPTHTTSDYDSTHET 505

  Fly   545 ATALSSTVGGGIGGIGGSIKMRASATDIETNALNGARDAIVASNNGNNGNNGNNGNNEYSILQLN 609
            ..:.||.:                   :.::..:||:|...:..:                    
 Frog   506 NHSDSSDI-------------------LPSDEPDGAKDPAQSRKS-------------------- 531

  Fly   610 NTIIQCHFNDDDFRALVKDLKRKVEYTERMNWLCLSKRPLGPPHRKSSLPKHQEVKRRFLEICDT 674
                ...|..:....|:...::.|          |:..||                  .:|..|:
 Frog   532 ----SASFQGEVLHPLIHSEEKAV----------LAPEPL------------------LMEDLDS 564

  Fly   675 TFSEEVRAALRLPAFDSYEWSDADVIHLMQ----TMFVELGFIEKFSIPVDTLREWLYEVYKHYN 735
            ...|...  ...|.||..|.:......::.    .:|.::|.:|.|.||:.....:.:.:...|.
 Frog   565 LMGEINN--WNFPIFDLVEKTGQKTGRILSQVSYRLFEDMGLLETFKIPLREFMNYFHALESGYR 627

  Fly   736 EVPFHNFRHCFCVAQMMYAITRQA-----NLLSRLG----------------------------- 766
            ::|:||..|...|...::.::.||     |.:|..|                             
 Frog   628 DIPYHNRIHATDVLHAVWYLSTQAIPGLPNAVSEQGSASDSDSDSGITHGHMGYVFSKMYNPSDD 692

  Fly   767 ----------DLECLILLVSCICHDLDHPGYNNIYQINARTELALRYNDISPLENHHCSIAFRL- 820
                      .||.:.|.|:...||.||||..|.:.:......|:.|||.|.|||||.:.|:.| 
 Frog   693 TYGCLSGNIPSLELMALYVAAAMHDYDHPGRTNAFLVATNAPQAVLYNDRSVLENHHAAAAWNLF 757

  Fly   821 LEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFM-----EITPIFDYSNRAHINL 880
            |..||.|...|.....|...|..:|..|||||:.:|.:.|.:|.     |::|..|:||.....|
 Frog   758 LSRPEYNFLVNLDHMEFKRFRFLVIEAILATDLKKHFDFLAEFNAKVNGEVSPGIDWSNENDRLL 822

  Fly   881 LCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVTPFMDPDKVSKPGSQVRFI 945
            :|.:.||:|||:..|:..|:...|.:.::.||:.|...|.|.|||::||||.........|..||
 Frog   823 VCQMCIKLADINGPAKFKDLHLKWTEGIVNEFYEQGDEESSLGLPISPFMDRSAPQLAKLQESFI 887

  Fly   946 GLVLLPL---FEALGELVPELTELIIIPVRIALEYYRRLNDAQTKTRKSVADSNTSATSDSNSGT 1007
            ..::.||   :::.| |:|.                :.|:::..:......|......::..|..
 Frog   888 THIVGPLCHSYDSAG-LMPG----------------KWLDESDERDESDDTDEQEEEDTEEESSE 935

  Fly  1008 IDSNAAMVST 1017
            .:.:.|.:|:
 Frog   936 PNESLASMSS 945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:459723 83/280 (30%)
pde3aXP_031753954.1 PRK07764 <19..209 CDD:236090
PDEase_I 631..894 CDD:459723 78/262 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.