DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and XB990243

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_012822440.1 Gene:XB990243 / 100493061 XenbaseID:XB-GENE-990244 Length:521 Species:Xenopus tropicalis


Alignment Length:516 Identity:196/516 - (37%)
Similarity:289/516 - (56%) Gaps:60/516 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   503 FHRGSCGAAGEHLLAANSIA--NRATIILSKSCSNVDGDATATAATALSSTVGGGIGGIGGSIKM 565
            |.:.|..|..:.||.|::..  ..|.|:|.|.     |...||.:|...::.......:..||..
 Frog    26 FSQHSSPAEIKELLCASAGLPWQAAIILLDKK-----GTVVATDSTIPKNSKSSAYRIVSRSISP 85

  Fly   566 RASATDIETNALNGARDAIVASNNGNNGNNGNNGNNEYSILQLNNTI------IQCHFNDDDFRA 624
            |....|...|.|:...:..               :..:.:.::...:      ::.....:..:|
 Frog    86 RPEKEDFFQNILSQVTEEF---------------SRAFRVTEMKREVMERLAMLERRMEVEGLKA 135

  Fly   625 L--------VKDLKRKVE-YTERMNWLCL-----SKRPLGPPHRKSSLPKHQEVKRRFLEICDTT 675
            :        :|:|:.::| .|.|::..|.     ..:.|.|.....:.||:             |
 Frog   136 IDIDKCKNELKNLRDEMEKKTSRLSCPCRFYYSEDIKKLNPRRDVPTYPKY-------------T 187

  Fly   676 FSEEVRAALRLPAFDSYEWSDADVIHLMQTMFVELGFIEKFSIPVDTLREWLYEVYKHYNEVPFH 740
            .|.|...||:.|.||.:.|...:::..::.|:.:||.:.:|::...||:.||..:.::|...|||
 Frog   188 LSSETIDALKKPTFDVWHWEYNEMLSCLEFMYHDLGLVREFNMNPITLKRWLLCIQENYRTNPFH 252

  Fly   741 NFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALRYND 805
            ||||||||.||||.:....||..::..:|..:|:.|.:|||||||||||.|||||.||||:||||
 Frog   253 NFRHCFCVTQMMYGMIHLCNLQEKMSLIELGVLMTSAVCHDLDHPGYNNTYQINAHTELAIRYND 317

  Fly   806 ISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEITPIF 870
            :||||||||::||::|..||.|||.|.:.:.|..||:.|||.|||||||||.|||..|.::.|.|
 Frog   318 MSPLENHHCAVAFQILAQPENNIFANITPELFKQIRQSIIRLILATDMARHGEILESFKKVLPNF 382

  Fly   871 DYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVTPFMDPDKV 935
            |:||..|:..|.|:|||..|||||.||..|||||:|.||:|:|.||..|||||||||||||.|||
 Frog   383 DFSNEDHVKTLQMVLIKCCDISNEVRPTKVAEPWVDCLLEEYFMQSDREKSEGLPVTPFMDRDKV 447

  Fly   936 SKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRLND-----AQTKTRKS 991
            :||.:|:.||..||:|:||::.:|.|.:.|::::|:|.|.::|..|.:     |:.:.:||
 Frog   448 TKPKAQIGFIKFVLIPMFESVMKLFPHIEEVMVLPLREARDHYEELMEIEEALAEVQQKKS 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 138/227 (61%)
XB990243XP_012822440.1 GvpK <110..>153 CDD:282916 3/42 (7%)
PDEase_I 251..479 CDD:278654 138/227 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 299 1.000 Domainoid score I1431
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 1 1.000 - - FOG0004612
OrthoInspector 1 1.000 - - oto103524
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2223
SonicParanoid 1 1.000 - - X3819
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.950

Return to query results.
Submit another query.