DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde9 and pde6a

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_002936750.3 Gene:pde6a / 100489913 XenbaseID:XB-GENE-988755 Length:866 Species:Xenopus tropicalis


Alignment Length:416 Identity:113/416 - (27%)
Similarity:187/416 - (44%) Gaps:71/416 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   618 NDDDFRALVKDLKRKVEYTERMNWLCLSKRPLGPPHRKSS------LPKHQEVKRRFLEICDTTF 676
            |.|.:..:.|...||..|.:.:|:           |.|.|      :.|.:|:..|..|.|:   
 Frog   433 NTDTYEKMNKLENRKDIYQDMVNY-----------HVKCSNDELQIILKTKEIYNRLPEECE--- 483

  Fly   677 SEEVRAALR--LP---AFDSYE--WSDADVIHLMQT-----MFVELGFIEKFSIPVDTLREWLYE 729
            .||:...|:  ||   ..:.||  :||..|..|...     ::.||..::||.||.:.|..:|:.
 Frog   484 EEELYEILQEELPDPTEAEIYEFHFSDLPVSELFLVKCAIQIYYELEVVDKFHIPQEVLVRFLFS 548

  Fly   730 VYKHYNEVPFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQIN 794
            |.|.|.::.:||:||.|.|.|.|:.:....||.....|||.:.::.:..|||:||.|.||:||:.
 Frog   549 VSKGYRKITYHNWRHGFNVGQTMFTLLMTGNLKRYYTDLEAMAMVTAAFCHDIDHRGTNNLYQMK 613

  Fly   795 ARTELALRYNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARH--- 856
            :...|| :.:..|.||.||......||:....|||:|.:|..:::....:...|:|||:|.:   
 Frog   614 SGHPLA-KLHGSSILERHHLEFGKFLLKDESLNIFQNLNRRQYDHAIHMMDIAIIATDLALYFKK 677

  Fly   857 ----NEILTQFMEITPIFDYS-----NRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEF 912
                .:|:.|....|...|::     .:....::..:::...|:|..|:|.|:.......:..||
 Frog   678 RAMFQKIVDQSQTFTSEKDWTEYMMLEQTRKEIVMAMMMTACDLSAIAKPWDIQSKVALLVAAEF 742

  Fly   913 FAQSAAEKS--EGLPVTPFMDPDKVSK-PGSQVRFIGLVLLPLFEALGELVPELTELIIIPV--- 971
            :.|...|::  :..|: |.||.:|..: |..|..||..|...:::......||     |.|:   
 Frog   743 WEQGDLERTVLQQNPI-PMMDRNKADELPKLQCGFIDFVCTFVYKEFSRFHPE-----IQPMYDG 801

  Fly   972 ---------RIALEYYRRLNDAQTKT 988
                     ::|.||     ||:.||
 Frog   802 ILNNKKEWKKLADEY-----DAKMKT 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 67/242 (28%)
pde6aXP_002936750.3 GAF 73..232 CDD:214500
GAF 254..441 CDD:214500 2/7 (29%)
PDEase_I 558..802 CDD:395177 69/250 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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