DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde9 and pde6b

DIOPT Version :10

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_012808736.2 Gene:pde6b / 100487945 XenbaseID:XB-GENE-961019 Length:859 Species:Xenopus tropicalis


Alignment Length:400 Identity:105/400 - (26%)
Similarity:185/400 - (46%) Gaps:57/400 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   658 LPKHQEVKRRFLEICDTTFSEEVRAALR--LPA---FDSYEW-------SDADVIHLMQTMFVEL 710
            ||..:::.:...| |:   .:|:...|:  ||.   |:.||:       ::.|::.....|:.||
 Frog   473 LPTREKLGKEVTE-CE---EDEIAKTLKQVLPGPTKFEIYEFRFSDFDCTEIDLVKCGIQMYYEL 533

  Fly   711 GFIEKFSIPVDTLREWLYEVYKHYNEVPFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLV 775
            |.::||.:|.:.|..::|.:.|.|..|.:||:||.|.|||.|:.:.....|.....|||.:.::.
 Frog   534 GVVKKFQVPPEALVRFMYAMKKGYRRVTYHNWRHGFNVAQTMFTLLMTGKLKRYYTDLEAMAMVT 598

  Fly   776 SCICHDLDHPGYNNIYQINARTELALRYNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNI 840
            :..|||:||.|.||:||:.::..|| :.:..|.||.||......||.....|||:|.:|....::
 Frog   599 AGFCHDIDHRGTNNLYQMKSQHPLA-KLHGSSILERHHLEFGKFLLADESMNIFQNLNRRQHEHV 662

  Fly   841 REGIIRCILATDMARHNEILTQFMEITPIFDYS---------------NRAHINLLCMILIKVAD 890
            ...:...|:|||:|.:.:..|.|.:|.   |.|               ......::..:::...|
 Frog   663 IHLMDIAIIATDLALYFKKRTMFQKIV---DQSKTYEDEQKWTEYLSLETTRKEIVMAMMMTACD 724

  Fly   891 ISNEARPMDVAEPWLDRLLQEFFAQSAAEKS--EGLPVTPFMDPDKVSK-PGSQVRFIGLVLLPL 952
            :|...:|.:|.......:..||:.|...|::  :..|: |.||.:|.:: |..|..||..|...:
 Frog   725 LSAITKPWEVQSKVALLVAAEFWEQGDLERTVLQQQPI-PMMDRNKSAELPKLQCGFIDFVCTFV 788

  Fly   953 FEALGELVPELTELI--IIPVR-----IALEYYRRLNDAQTKT---RKSVADSNTSATSDSNSGT 1007
            ::.......|:..::  ::..|     :|.||     :|:.||   .|...:...:|...:.:| 
 Frog   789 YKEFARFHEEIQPMLDGLLNNRKEWKALADEY-----EAKVKTVEEEKKKREEELAARKAAAAG- 847

  Fly  1008 IDSNAAMVST 1017
              :|||..||
 Frog   848 --ANAAKSST 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:459723 66/245 (27%)
pde6bXP_012808736.2 GAF 77..236 CDD:214500
GAF 258..445 CDD:214500
PDEase_I 562..806 CDD:459723 66/248 (27%)
Blue background indicates that the domain is not in the aligned region.

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