DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde9 and pde4c

DIOPT Version :10

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_004911040.1 Gene:pde4c / 100380081 XenbaseID:XB-GENE-1002336 Length:801 Species:Xenopus tropicalis


Alignment Length:673 Identity:150/673 - (22%)
Similarity:279/673 - (41%) Gaps:179/673 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   562 SIKMRASATDIETN----ALNGARDAIVASNNGNNGNNGNNGNNEYSILQLNNTIIQCHFNDDDF 622
            :::.|.|.:::.:|    .||  |:....|....:||.    .:||    :::|.:......:..
 Frog   226 TLQTRHSVSEMASNKFKRMLN--RELTHLSETSRSGNQ----VSEY----ISSTFLDKQHEVEIP 280

  Fly   623 RALVKDLKRKVEYTERMNWLCLSKRPLGP-------PHRKS----SLPK-----HQEVKRRFLEI 671
            ..:.|:..:|             |||:..       .|..|    |:|:     .|||       
 Frog   281 TPVSKEKDKK-------------KRPMSQISGVKKLTHSSSFSNCSIPRFGVKTEQEV------- 325

  Fly   672 CDTTFSEEVRAALR--LPAFDSYEWS-DADVIHLMQTMFVELGFIEKFSIPVDTLREWLYEVYKH 733
               ..::||....:  |..|...|:| :..:..:|.::|.|...::.|.|||||...::..:..|
 Frog   326 ---PLAKEVENINKWGLDIFKVAEYSGNRPLTVIMYSIFQERDLLKTFHIPVDTFITYMMTLEDH 387

  Fly   734 Y-NEVPFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINART 797
            | ::|.:||..|...|||..:.:.....|.:...|||.:..:.:...||:||||.:|.:.||..:
 Frog   388 YHSDVAYHNNIHAADVAQSTHVLLSTPALEAVFTDLEIMAAIFASAIHDVDHPGVSNQFLINTNS 452

  Fly   798 ELALRYNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQ 862
            ||||.|||.|.|||||.::.|:||:...|:||:|.::.....:|:.:|..:|||||::|..:|..
 Frog   453 ELALMYNDASVLENHHLAVGFKLLQEENCDIFQNLTKKQRQTLRKMVIDMVLATDMSKHMNLLAD 517

  Fly   863 F-----------MEITPIFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQS 916
            .           :.:..:.:||:|..:   ...::..||:||..:|:::...|.||::.|||.|.
 Frog   518 LKTMVETKKVTSLGVLLLDNYSDRIQV---LQNMVHCADLSNPTKPLEIYRQWTDRIIVEFFHQG 579

  Fly   917 AAEKSEGLPVTPFMDPDKVSKPGSQVRFIGLVLLPLFEALGELV-PELTELIIIPVRIALEYYRR 980
            ..|:.:|:.::|..|....|...|||.||..::.||:|...:|| |:..|::             
 Frog   580 DREREKGMEISPMCDKHNASVEKSQVGFIDYIVHPLWETWADLVHPDAQEIL------------- 631

  Fly   981 LNDAQTKTRKSVADSNTSATSDSNSGTIDSN-----AAMVSTPGGASDKLSLDKGQGNSQGSGGG 1040
                                     .|::.|     :.:..:|....::...|:|          
 Frog   632 -------------------------DTLEDNREWYQSMIPQSPSPPPEEQDPDRG---------- 661

  Fly  1041 GGGGGGGGAGGGTGSGCGSNAAGSVSPQMPRSGSGISVKSRRSIPSQKSASRTSVDEPGGMASEL 1105
                               ||||.      :....::::......:::..:.:.:||... .|::
 Frog   662 -------------------NAAGD------KFQFELTLEEEGESDTEQEDTESPIDEENS-DSKI 700

  Fly  1106 HDLPEGSESGD-SETATEVD----VAEKTSKFKVDTEGSSNRSK--------------------- 1144
            |...:.:::.| :|.::.||    |:.|....::..:.:..:.|                     
 Frog   701 HATDDSAQASDEAEQSSPVDLCMTVSSKLDHLEIPPKSTLTKQKKILNFDNLKLAGERTIQQKEV 765

  Fly  1145 -SSHSTSRKSSREKRPSMIGELC 1166
             |||:|...|:|::.... .|:|
 Frog   766 SSSHATPANSARQEGTGQ-AEIC 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:459723 80/239 (33%)
pde4cXP_004911040.1 PDE4_UCR 156..272 CDD:465648 12/55 (22%)
PDEase_I 394..634 CDD:459723 80/280 (29%)

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