DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde9 and pde1a

DIOPT Version :9

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:NP_001096444.1 Gene:pde1a / 100125056 XenbaseID:XB-GENE-949176 Length:538 Species:Xenopus tropicalis


Alignment Length:501 Identity:133/501 - (26%)
Similarity:216/501 - (43%) Gaps:95/501 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   600 NNEYSILQLNNTIIQC---HFNDDDFRALVKDLKRKVEY------------TERM---------- 639
            :|:..:.:|.. |::|   .....|..  |.|||..:||            |.|:          
 Frog    23 SNDKMVQRLQG-ILRCLVKQLEKGDIN--VTDLKNNIEYAASVLEAVYIDETRRLLDTEDELSDI 84

  Fly   640 ----------NWLCLS-KRPLGPPHRK-SSLPKHQEV-------------KRRFLEICDTTFSEE 679
                      :||..: .|.:|...|: ...||.:.:             .||...|...|:...
 Frog    85 HTDSVPLEVRDWLASTFTRKMGMRKRRPEEKPKFRSIVHAVQAGIFVERMYRRSSNIAGLTYPSS 149

  Fly   680 VRAALR---LPAFDSYEWSDADVIHLMQTMFVEL----GFIEKFSIPVDTLREWL------YEVY 731
            |.|:::   ..||:.:..::|...|.::.|..||    ....:|.|||..|..::      |..|
 Frog   150 VIASMKDVDRWAFNVFTLNEASGEHALKFMVYELFTRYDLTNRFKIPVSNLVSFVEALEVGYSKY 214

  Fly   732 KHYNEVPFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINAR 796
            |:    |:||..|...|.|.::.|.....::..|.:||.|.::.:...||.:|.|..|.:.|..|
 Frog   215 KN----PYHNLVHAADVTQTVHYIILHTGIMHWLTELEILAMIFAAAIHDFEHTGTTNNFHIQTR 275

  Fly   797 TELALRYNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILT 861
            :::|:.|||.|.|||||.|.|:|:::..|.|||.|.|:|.:.::|..:|..:|:|||:.|.:.|.
 Frog   276 SDVAILYNDRSVLENHHVSAAYRIMQDDEMNIFINLSKDDWRDLRTLVIEMVLSTDMSGHFQQLK 340

  Fly   862 QFMEITPIFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPV 926
            .........:..::|.   ...:::..||||:.|:|.|:...|.:.|::|||.|...|.:.|||.
 Frog   341 TMRSTLQQPEGIDKAK---AMSLILHAADISHPAKPWDMHLRWTNLLMEEFFRQGDKEAALGLPF 402

  Fly   927 TPFMDPDKVSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRLNDAQTKTRKS 991
            :|..|........||:.||..::.|.|    .|:.:.||.|:.|          |.:...|:..|
 Frog   403 SPLCDRKSTMVAQSQIGFIDFIVEPTF----TLLTDSTEKIVFP----------LIEEAAKSDNS 453

  Fly   992 VADSNTSATSDSNSGTIDSNAAMVSTPGGASDKLSLDKGQGNSQGS 1037
            |.|.::...|:...||        .||...|.:.|...|...|:.|
 Frog   454 VFDKSSQNNSEVVRGT--------DTPRKPSVRTSQMDGSSPSEYS 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 74/227 (33%)
pde1aNP_001096444.1 PDEase_I_N 77..133 CDD:312112 7/55 (13%)
PDEase_I 218..446 CDD:306695 77/244 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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