DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde9 and pde1b

DIOPT Version :10

Sequence 1:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster
Sequence 2:XP_017946519.1 Gene:pde1b / 100036722 XenbaseID:XB-GENE-987197 Length:554 Species:Xenopus tropicalis


Alignment Length:482 Identity:123/482 - (25%)
Similarity:200/482 - (41%) Gaps:101/482 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   602 EYSILQLNNTIIQCHFNDDDFRALVKDLKRKVEYTERM---NWLCLSKRPLG-----PPHRKSSL 658
            :|.:.||.|..:.           :.:||:.:|||..:   .::..:::.|.     |..|..|:
 Frog    58 KYMVKQLENGEVN-----------IVELKKNLEYTASLLEAVYIDETRQILDTDDELPEMRSDSV 111

  Fly   659 P-------------------KHQEVKRRFLEICD----------------TTFSEEVRAA----- 683
            |                   :..|.|.||..|..                |.......||     
 Frog   112 PSEVRDWLASTFTQQTRSTGRRSEEKPRFRSIVHAVQAGIFVERMFRRSYTAVGPNYSAAVVNSL 176

  Fly   684 --LRLPAFDSYEWSDADVIHLMQTMFVEL----GFIEKFSIPVDTLREWL------YEVYKHYNE 736
              |.|..||.:..:.....|.::|:..||    ....:|.|||..|..:|      |..||:   
 Frog   177 KHLDLWDFDVFVLNRVSEDHALKTIVFELLSRHNLNSRFKIPVAFLMSFLDSLESGYGKYKN--- 238

  Fly   737 VPFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELAL 801
             |:||..|...|.|.::....:..::..|.::|.|.::.:...||.:|.|..|.:.|..:::.|:
 Frog   239 -PYHNQIHAADVTQTVHCFLLRTGMVHCLNEIEILAIIFAAAIHDFEHTGTTNSFHIQTKSDCAI 302

  Fly   802 RYNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARH-NEILTQFME 865
            .|||.|.|||||.|..:|:::..|.|||.|.::|.|..:|..:|..:|||||:.| .::.|....
 Frog   303 LYNDRSVLENHHVSAVYRIMQDDEMNIFVNLTKDEFTELRSLVIEMVLATDMSCHFQQVKTMKTS 367

  Fly   866 ITPIFDYSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVTPFM 930
            :..:........::|    |:..||||:..:...|...|...|::|||.|...|...|||.:|..
 Frog   368 LQQLETIDKSKALSL----LLHAADISHPTKQWKVHARWTKALMEEFFRQGDKEAEMGLPFSPLC 428

  Fly   931 DPDKVSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRLNDAQTKTRKSVADS 995
            |........||:.||..::.|.|..|    .::.|..::|          |.:.::|: ||.|..
 Frog   429 DRKSTLVAQSQIGFIEFIVDPTFSVL----TDVAEKTVLP----------LVEERSKS-KSTASV 478

  Fly   996 NTSATS------DSNSGTIDSNAAMVS 1016
            |.|::.      |.:|...|.||.:.|
 Frog   479 NQSSSQWRQPSIDDHSEMGDINADIKS 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde9NP_727644.3 PDEase_I 739..967 CDD:459723 69/228 (30%)
pde1bXP_017946519.1 PDEase_I_N 95..155 CDD:462497 10/59 (17%)
PDEase_I 240..467 CDD:459723 71/244 (29%)

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