Sequence 1: | NP_997780.1 | Gene: | rnf128a / 322325 | ZFINID: | ZDB-GENE-030131-1044 | Length: | 389 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_497129.1 | Gene: | H10E21.5 / 175169 | WormBaseID: | WBGene00019185 | Length: | 473 | Species: | Caenorhabditis elegans |
Alignment Length: | 411 | Identity: | 111/411 - (27%) |
---|---|---|---|
Similarity: | 159/411 - (38%) | Gaps: | 128/411 - (31%) |
- Green bases have known domain annotations that are detailed below.
Zfish 9 VFSWLLLASVLQV-SSVRL----AEASYLCTAYLNISYTNPENNRSTWFQEEMGLYGQDSPKAYV 68
Zfish 69 KGNVYLASPTYGCDDDTFYGRPNGSKGWIALIQRGNGC-----TFTEKINIAAMNGAAAAIIFND 128
Zfish 129 FGSENRVIQMSHPGTTIVAIMIGNYRGMELVQLLDQGVPVAIAIEVGKQ---------HGP---- 180
Zfish 181 -----WMSHYSVFFVSISFFIVTAATVGYFIFYSARRLNSLRQQNRSQKKLKAEAKKAIGQLQVR 240
Zfish 241 TLRQG-DQEIGPDADACAVCIDSYKAGDVLSILTCNHFFHKSCIEPWLLEHRTCPMCKCDILKAL 304
Zfish 305 G-------------------------VELDVEEQPQISVPDFRPFSTSEDLHS-----ETASHTH 339
Zfish 340 SETASSGYASMHGNEHLAPPE 360 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rnf128a | NP_997780.1 | PA_GRAIL_like | 38..172 | CDD:239037 | 21/138 (15%) |
zf-RING_2 | 256..297 | CDD:290367 | 27/40 (68%) | ||
H10E21.5 | NP_497129.1 | HRD1 | <150..325 | CDD:227568 | 64/177 (36%) |
RING-H2_GRAIL | 226..273 | CDD:319582 | 32/49 (65%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR22765 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X295 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
5 | 4.970 |