DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Agpat1 and SLC1

DIOPT Version :10

Sequence 1:NP_572828.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_010231.1 Gene:SLC1 / 851508 SGDID:S000002210 Length:303 Species:Saccharomyces cerevisiae


Alignment Length:303 Identity:106/303 - (34%)
Similarity:158/303 - (52%) Gaps:54/303 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FRYYFKFLM---------YYGIVSFNSIILIPAFLTRPCDV---RNLL-WASTWC--HRVSTLIG 78
            |.||.:.::         :||:::  ||:         |.:   ::|. |.:..|  |.:..::|
Yeast     7 FLYYLRSVLVVLALAGCGFYGVIA--SIL---------CTLIGKQHLAQWITARCFYHVMKLMLG 60

  Fly    79 LRWELRGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMNKCTVVAKRELFYAWPFGLAAW---L 140
            |..::.|:|:||| :..|::|||||:||:..:..|:  ...|||.||:.|.|. ||  ..|   |
Yeast    61 LDVKVVGEENLAK-KPYIMIANHQSTLDIFMLGRIF--PPGCTVTAKKSLKYV-PF--LGWFMAL 119

  Fly   141 AGLIFIDRVRGEKARETLNDVNRRIKKQRIKLWVFPEGTRRNTGALH--PFKKGAFHMAIDQQIP 203
            :|..|:||.:.::|.:|||.....:||.:..|||||||||..|..|.  ||||||||:|...:||
Yeast   120 SGTYFLDRSKRQEAIDTLNKGLENVKKNKRALWVFPEGTRSYTSELTMLPFKKGAFHLAQQGKIP 184

  Fly   204 ILPVVFSSYCTFLNDKKKILNSGRIVITTLPPVSTEGLTKDDIDVLMERVRSQMIETFK------ 262
            |:|||.|:..|.::.|..:.|.|.:::..|.|:|||.||||.|....|:||.||::|.|      
Yeast   185 IVPVVVSNTSTLVSPKYGVFNRGCMIVRILKPISTENLTKDKIGEFAEKVRDQMVDTLKEIGYSP 249

  Fly   263 -----------VTSAEALHRYKPIKKVGIPAASSASTSSTTTT 294
                       :..|...|..|..||:......|.|.|:...|
Yeast   250 AINDTTLPPQAIEYAALQHDKKVNKKIKNEPVPSVSISNDVNT 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_572828.1 PlsC 65..259 CDD:439974 86/200 (43%)
SLC1NP_010231.1 AGP_acyltrn 60..191 CDD:129621 63/136 (46%)

Return to query results.
Submit another query.