DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat1 and LPCAT1

DIOPT Version :9

Sequence 1:NP_001259494.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_011512434.1 Gene:LPCAT1 / 79888 HGNCID:25718 Length:571 Species:Homo sapiens


Alignment Length:254 Identity:55/254 - (21%)
Similarity:92/254 - (36%) Gaps:76/254 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PAFLTRPCD-----VRNLLWASTWCHRVSTLIGLRWELRGKEHLAKDQACIIVANHQSSLDVLGM 110
            ||...:..|     :...:|.:...|||:        ::|::.|..:.|.:.:|.|.|..|.:.:
Human   125 PALWRKVVDFLLKAIMRTMWFAGGFHRVA--------VKGRQALPTEAAILTLAPHSSYFDAIPV 181

  Fly   111 FNIWHVMNKCTVVAKRE----------LFYAWPFGLAAWLAGLIFIDRVRGEKARETLNDVNRRI 165
                 .|...::|.|.|          :.|..|          :|:.|...:..|:|:.::.||.
Human   182 -----TMTMSSIVMKAESRDIPIWGTLIQYIRP----------VFVSRSDQDSRRKTVEEIKRRA 231

  Fly   166 KK--QRIKLWVFPEGTRRNTGALHPFKKGAFHMAIDQQIPILPVV-------------------- 208
            :.  :..::.:|||||..|...|..||.|||...    .|:.|||                    
Human   232 QSNGKWPQIMIFPEGTCTNRTCLITFKPGAFIPG----APVQPVVLRYPNKLDTITWTWQGPGAL 292

  Fly   209 ---FSSYCTFLNDKKKILNSGRIVITTLPPVSTEGLTKDDIDVLMERVRSQMIETFKVT 264
               :.:.|.|.|         ::.|..||..|.....|.:..:....||..|.|...|:
Human   293 EILWLTLCQFHN---------QVEIEFLPVYSPSEEEKRNPALYASNVRRVMAEALGVS 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_001259494.1 LPLAT_AGPAT-like 70..254 CDD:153251 46/218 (21%)
LPCAT1XP_011512434.1 PlsC 95..>279 CDD:223282 42/180 (23%)
LPLAT_LPCAT1-like 140..351 CDD:153253 52/239 (22%)
EF-hand_7 458..516 CDD:290234
EF-hand_8 469..520 CDD:290545
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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