DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat1 and lpgat1

DIOPT Version :9

Sequence 1:NP_001259494.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001025129.1 Gene:lpgat1 / 561832 ZFINID:ZDB-GENE-030131-2906 Length:371 Species:Danio rerio


Alignment Length:329 Identity:75/329 - (22%)
Similarity:120/329 - (36%) Gaps:86/329 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MLPFLYETNHIFRYYFKFLMYYGIVSFNSIILIPAF-----LTRPCDV--------------RNL 63
            |.|.|.....:.....|.|:.:..:..|:.:.||::     :.:|..|              |.|
Zfish     1 MAPHLDVARKLVWILIKSLLRFTFMFVNNCVAIPSYCLYLIVLQPLRVLDAQTFWYIEGVMFRWL 65

  Fly    64 L-----WASTWCHRVSTLIGLRWELRGKE--HLAKDQACIIVANHQSSLDVLGMFNIWHVMNKCT 121
            |     |.  ||...:.   ..|   |.:  .:.:|:|.:|| |||::.||..:  :..:.:|.|
Zfish    66 LAMVASWG--WCAGYTV---TEW---GDDVSPMTEDEAMVIV-NHQATGDVCTL--MMCLQDKGT 119

  Fly   122 VVAKR-----ELFYAWPFGLAAWLAGLIFI--DRVRGEKARETLNDVNRRIKKQRIKLWV--FPE 177
            ||.|.     .:|....||:.:.:.|..||  .:...||....|.|...:....|.:.|:  |||
Zfish   120 VVRKMMWLMDHVFKYTNFGVVSLIHGDFFIRQGKAHREKQLVYLKDHLDKFYYSRDRKWIVLFPE 184

  Fly   178 GTRRNTGALHPFKKGAFHMAIDQQIPILPVVFSSYCTFLNDKKKILNSGRIVITTLPPVSTEGLT 242
            |     |.|...::.:...|....:|        |.|.:...:  |.:.:|::..|.|....|:.
Zfish   185 G-----GFLRKRRETSQSFAKKNDLP--------YLTHVTLPR--LGATQIILKNLGPQQENGIL 234

  Fly   243 KDD----------------ID--VLMERVRSQMIETF-----KVTSAEALHRYKPIKKVGIPAAS 284
            ..|                ||  :.....|...|:|:     ..|.....:|..|||.|  |..|
Zfish   235 GTDGSPPGQSNKPKGLQWVIDMTIAYPNARPMDIQTWIFGYRDPTVTHVHYRTYPIKDV--PVDS 297

  Fly   285 SAST 288
            .|.|
Zfish   298 EALT 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_001259494.1 LPLAT_AGPAT-like 70..254 CDD:153251 47/212 (22%)
lpgat1NP_001025129.1 LPLAT_LCLAT1-like 69..286 CDD:153252 53/242 (22%)
Acyltransf_C 275..>331 CDD:292694 10/29 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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