DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat1 and lpgat1

DIOPT Version :10

Sequence 1:NP_572828.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001025129.1 Gene:lpgat1 / 561832 ZFINID:ZDB-GENE-030131-2906 Length:371 Species:Danio rerio


Alignment Length:329 Identity:75/329 - (22%)
Similarity:120/329 - (36%) Gaps:86/329 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MLPFLYETNHIFRYYFKFLMYYGIVSFNSIILIPAF-----LTRPCDV--------------RNL 63
            |.|.|.....:.....|.|:.:..:..|:.:.||::     :.:|..|              |.|
Zfish     1 MAPHLDVARKLVWILIKSLLRFTFMFVNNCVAIPSYCLYLIVLQPLRVLDAQTFWYIEGVMFRWL 65

  Fly    64 L-----WASTWCHRVSTLIGLRWELRGKE--HLAKDQACIIVANHQSSLDVLGMFNIWHVMNKCT 121
            |     |.  ||...:.   ..|   |.:  .:.:|:|.:|| |||::.||..:  :..:.:|.|
Zfish    66 LAMVASWG--WCAGYTV---TEW---GDDVSPMTEDEAMVIV-NHQATGDVCTL--MMCLQDKGT 119

  Fly   122 VVAKR-----ELFYAWPFGLAAWLAGLIFI--DRVRGEKARETLNDVNRRIKKQRIKLWV--FPE 177
            ||.|.     .:|....||:.:.:.|..||  .:...||....|.|...:....|.:.|:  |||
Zfish   120 VVRKMMWLMDHVFKYTNFGVVSLIHGDFFIRQGKAHREKQLVYLKDHLDKFYYSRDRKWIVLFPE 184

  Fly   178 GTRRNTGALHPFKKGAFHMAIDQQIPILPVVFSSYCTFLNDKKKILNSGRIVITTLPPVSTEGLT 242
            |     |.|...::.:...|....:|        |.|.:...:  |.:.:|::..|.|....|:.
Zfish   185 G-----GFLRKRRETSQSFAKKNDLP--------YLTHVTLPR--LGATQIILKNLGPQQENGIL 234

  Fly   243 KDD----------------ID--VLMERVRSQMIETF-----KVTSAEALHRYKPIKKVGIPAAS 284
            ..|                ||  :.....|...|:|:     ..|.....:|..|||.|  |..|
Zfish   235 GTDGSPPGQSNKPKGLQWVIDMTIAYPNARPMDIQTWIFGYRDPTVTHVHYRTYPIKDV--PVDS 297

  Fly   285 SAST 288
            .|.|
Zfish   298 EALT 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_572828.1 PlsC 65..259 CDD:439974 50/222 (23%)
lpgat1NP_001025129.1 LPLAT_LCLAT1-like 69..286 CDD:153252 53/242 (22%)
Acyltransf_C 275..>326 CDD:465006 10/29 (34%)

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