DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat1 and lpcat1

DIOPT Version :9

Sequence 1:NP_001259494.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001037806.2 Gene:lpcat1 / 555969 ZFINID:ZDB-GENE-060503-915 Length:517 Species:Danio rerio


Alignment Length:134 Identity:35/134 - (26%)
Similarity:59/134 - (44%) Gaps:12/134 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 GLRW-ELRGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMNKCTVVAKRELFYAWPFGLAAWLA 141
            |..| .::|:..|..:...:.:|.|.|..|.:.:     .|...::|.|.|......:|......
Zfish   105 GFHWVRVKGRPALPSEAPILTMAPHSSYFDAIPV-----TMTMASIVMKAESKDIPVWGTLIKFI 164

  Fly   142 GLIFIDRVRGEKARETLNDVNRRIKK--QRIKLWVFPEGTRRNTGALHPFKKGAFHMAIDQQIPI 204
            ..:|:.|...:..|:|:.::.||...  :..::.:|||||..|...|..||.|||...    :|:
Zfish   165 RPVFVSRSDQDSRRKTVEEIKRRASSNGEWPQIMIFPEGTCTNRSCLIAFKPGAFIPG----VPV 225

  Fly   205 LPVV 208
            .|||
Zfish   226 QPVV 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_001259494.1 LPLAT_AGPAT-like 70..254 CDD:153251 35/134 (26%)
lpcat1NP_001037806.2 PlsC 52..>236 CDD:223282 35/134 (26%)
LPLAT_LPCAT1-like 97..308 CDD:153253 35/134 (26%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 129..134 2/4 (50%)
EF-hand_7 413..472 CDD:290234
EF-hand_8 424..475 CDD:290545
Di-lysine motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 514..517
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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