DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat1 and lpcat2

DIOPT Version :9

Sequence 1:NP_001259494.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001018492.1 Gene:lpcat2 / 553683 ZFINID:ZDB-GENE-050522-229 Length:529 Species:Danio rerio


Alignment Length:303 Identity:67/303 - (22%)
Similarity:112/303 - (36%) Gaps:80/303 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IELLGLFLLLMLPFLYETNHI--FRYYFKFLMYYGIVSFNSIILIPAFLTRPCDVRNLLWASTWC 70
            :.|..:||||:|..::..:.|  |....|     |:|.       |  :|.        |.....
Zfish    47 VPLRAIFLLLVLLVMWPVSVIITFGQSLK-----GVVE-------P--MTG--------WRRFLH 89

  Fly    71 HRVSTLI--------GLRWELRGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMNKC------T 121
            .||.|.:        |.:..::||:....:...:.||.|.|..|.:.          |      :
Zfish    90 RRVMTFLGRMYFFGMGFKVVVKGKKASTLEAPILAVAPHSSFFDAIA----------CIESGLPS 144

  Fly   122 VVAKRELFYAWPFGLAAWLAGLIFIDRVRGEKARETLNDVNRRIKK--QRIKLWVFPEGTRRNTG 184
            .|::.|...|..||........:.:.|...:..|.|:.::.||.|.  ...::.:|||||..|..
Zfish   145 TVSRIESLEAPIFGRFLRCVQPVLVSRTDPDSRRNTIIEIERRAKSGGHWPQVLIFPEGTCTNRS 209

  Fly   185 ALHPFKKGAFHMAIDQQIPILPVVFSSYCTFLNDKKKIL------NSGRIVITTL---------- 233
            .|..||:|.|...    :|:.||:.    .:.|....:.      .|.|:::.||          
Zfish   210 CLITFKQGGFVPG----VPVQPVLI----RYPNKLDTVTWTWQGPKSARLLLLTLCQLCTTVEVE 266

  Fly   234 ---PPVSTEGLTKDDIDVLMERVRSQMIETFKVTSAEALHRYK 273
               |.|.||...|..:. ..:.||:.|.::.|:...:  |.|:
Zfish   267 FLPPQVPTEMEKKCPLK-FAQSVRAVMAKSLKLPVTD--HTYE 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_001259494.1 LPLAT_AGPAT-like 70..254 CDD:153251 47/218 (22%)
lpcat2NP_001018492.1 PlsC 49..297 CDD:223282 64/288 (22%)
LPLAT_LPCAT1-like 98..309 CDD:153253 50/230 (22%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 128..133 2/4 (50%)
EGTC motif 202..205 2/2 (100%)
EFh 316..406 CDD:298682
EFh 378..440 CDD:238008
EF-hand_7 378..435 CDD:290234
EF-hand_7 415..473 CDD:290234
EFh 418..473 CDD:238008
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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