DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Agpat1 and AGPAT5

DIOPT Version :9

Sequence 1:NP_001259494.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_060831.2 Gene:AGPAT5 / 55326 HGNCID:20886 Length:364 Species:Homo sapiens


Alignment Length:343 Identity:77/343 - (22%)
Similarity:126/343 - (36%) Gaps:88/343 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MLPFLYETNHIFRYYFKFLMYYG-----IVSFNSIILIPAFLTRPCDVRNLLWASTWCHRVSTLI 77
            ||..|....:..||....::..|     ::::....|:.|||  |......|....:|...|.::
Human     1 MLLSLVLHTYSMRYLLPSVVLLGTAPTYVLAWGVWRLLSAFL--PARFYQALDDRLYCVYQSMVL 63

  Fly    78 -------GLRWELRGKEHLAKDQACII-VANHQSSLDVLGMFNIWHVMNKCTVVAKRE-----LF 129
                   |::..|.|  .|.|::..|| :|||||::|       |.|.:   ::|.|:     :.
Human    64 FFFENYTGVQILLYG--DLPKNKENIIYLANHQSTVD-------WIVAD---ILAIRQNALGHVR 116

  Fly   130 YAWPFGLAAWLA---------GLIFIDRVRGEKARETLNDVNRRIKK-QRIKLWVFPEGTRRN-- 182
            |....|| .||.         |.|::.|......:|..|.:...:.. ..:.|.:||||||.|  
Human   117 YVLKEGL-KWLPLYGCYFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVIFPEGTRYNPE 180

  Fly   183 ----TGALHPF--KKG-------------AFHMAIDQQIPILPVVFSSYCTFLNDKKKILNSGRI 228
                ..|...|  ::|             |.|:|.|.....|..::.  .|.:.:.|.  :.|: 
Human   181 QTKVLSASQAFAAQRGLAVLKHVLTPRIKATHVAFDCMKNYLDAIYD--VTVVYEGKD--DGGQ- 240

  Fly   229 VITTLPPVSTEGLTKD--------------DIDVLMERVRSQMIETFKVTSAEALHRYK---PIK 276
              ....|..||.|.|:              |:....|.:|..:.|.|::.....:..|:   |.:
Human   241 --RRESPTMTEFLCKECPKIHIHIDRIDKKDVPEEQEHMRRWLHERFEIKDKMLIEFYESPDPER 303

  Fly   277 KVGIPAASSASTSSTTTT 294
            :...|..|..|..|...|
Human   304 RKRFPGKSVNSKLSIKKT 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_001259494.1 LPLAT_AGPAT-like 70..254 CDD:153251 55/241 (23%)
AGPAT5NP_060831.2 PlsC 34..281 CDD:223282 62/268 (23%)
LPLAT_LCLAT1-like 63..263 CDD:153252 51/219 (23%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q9D517 93..98 3/4 (75%)
Acyltransf_C 258..318 CDD:292694 10/59 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.