DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Agpat1 and Agpat1

DIOPT Version :9

Sequence 1:	NP_001259494.1	Gene:	Agpat1 / 32230	FlyBaseID:	FBgn0030421	Length:	343	Species:	Drosophila melanogaster
Sequence 2:	XP_006256034.1	Gene:	Agpat1 / 406165	RGDID:	1303287	Length:	322	Species:	Rattus norvegicus

Alignment Length:	267	Identity:	113/267 - (42%)
Similarity:	163/267 - (61%)	Gaps:	2/267 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    13 LFLLLMLPFLYETNHIFRYYFKFLMYYGIVSFNSIILIPAFLTRPCDVRNLLWASTWCHRVSTLI 77
            |.|||:|..|:..:...:|:||...|.|.:.|.:|:.||....|..:|.|:.........|..|.
  Rat    51 LLLLLLLSTLWFCSSSAKYFFKMAFYNGWILFLAILAIPVCAVRGRNVENMKILRLLLLHVKYLY 115

  Fly    78 GLRWELRGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMNKCTVVAKRELFYAWPFGLAAWLAG 142
            |:|.|:||.:|....|..::|:|||||||:|||..:  :.::|..:|||||.:|...|||.||||
  Rat   116 GIRVEVRGAQHFPPTQPYVVVSNHQSSLDLLGMMEV--LPDRCVPIAKRELLWAGSAGLACWLAG 178

  Fly   143 LIFIDRVRGEKARETLNDVNRRIKKQRIKLWVFPEGTRRNTGALHPFKKGAFHMAIDQQIPILPV 207
            :|||||.|...|...:::|.:.:..|.:::||||||||.:.|::.|||:||||:|:..|:||:|:
  Rat   179 VIFIDRKRTGDAISVMSEVAQTLLTQDVRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQVPIVPI 243

  Fly   208 VFSSYCTFLNDKKKILNSGRIVITTLPPVSTEGLTKDDIDVLMERVRSQMIETFKVTSAEALHRY 272
            |.|||..|...|::...|||..:..||||.|||||.||:..|.:|||..|:..|:..|.:.|...
  Rat   244 VMSSYQDFYCKKERRFTSGRCQVRVLPPVPTEGLTPDDVPALADRVRHSMLTIFREISTDGLGGG 308

  Fly   273 KPIKKVG 279
            ..:||.|
  Rat   309 DCLKKPG 315

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Agpat1	NP_001259494.1	LPLAT_AGPAT-like	70..254	CDD:153251	86/183 (47%)
Agpat1	XP_006256034.1	LPLAT_AGPAT-like	104..290	CDD:153251	85/185 (46%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166335582
Domainoid	1	1.000	136	1.000	Domainoid score	I4802
eggNOG	1	0.900	-	-		E1_COG0204
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H55973
Inparanoid	1	1.050	216	1.000	Inparanoid score	I3522
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1623097at2759
OrthoFinder	1	1.000	-	-		FOG0001236
OrthoInspector	1	1.000	-	-		otm46392
orthoMCL	1	0.900	-	-		OOG6_100535
Panther	1	1.100	-	-	LDO	PTHR10434
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X864
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	14	13.800