DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat1 and Lpcat1

DIOPT Version :9

Sequence 1:NP_001259494.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001094205.1 Gene:Lpcat1 / 361467 RGDID:1311599 Length:534 Species:Rattus norvegicus


Alignment Length:231 Identity:55/231 - (23%)
Similarity:91/231 - (39%) Gaps:68/231 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ITMTSF-IELL--GLFLLLMLPFLY---------ETNHIFRYYFKFLMYYGIVSFNSIILIPAFL 54
            :|:|.| |.||  ...:||..||..         |.......:.|      :|.|    |:.|  
  Rat    49 MTLTLFPIRLLFAAFMMLLAWPFALVASLGPPDKEPEQPLALWRK------VVDF----LLKA-- 101

  Fly    55 TRPCDVRNLLWASTWCHRVSTLIGLRWELRGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMNK 119
                 :...:|.:...|||:        ::|::.|..:.|.:.:|.|.|..|.:.:     .|..
  Rat   102 -----IMRTMWFAGGFHRVA--------VKGRQALPTEAAILTLAPHSSYFDAIPV-----TMTM 148

  Fly   120 CTVVAKRE----------LFYAWPFGLAAWLAGLIFIDRVRGEKARETLNDVNRRIKK--QRIKL 172
            .::|.|.|          :.|..|          :|:.|...:..|:|:.::.||.:.  :..::
  Rat   149 SSIVMKAESRDIPIWGTLIRYIRP----------VFVSRSDQDSRRKTVEEIKRRAQSNGKWPQI 203

  Fly   173 WVFPEGTRRNTGALHPFKKGAFHMAIDQQIPILPVV 208
            .:|||||..|...|..||.|||...    :|:.|||
  Rat   204 MIFPEGTCTNRTCLITFKPGAFIPG----VPVQPVV 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_001259494.1 LPLAT_AGPAT-like 70..254 CDD:153251 38/151 (25%)
Lpcat1NP_001094205.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
PlsC 59..>242 CDD:223282 50/221 (23%)
LPLAT_LPCAT1-like 103..314 CDD:153253 39/160 (24%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 135..140 2/4 (50%)
EFh <350..412 CDD:298682
EFh 384..446 CDD:298682
EF-hand_7 421..479 CDD:290234
EF-hand_8 432..483 CDD:290545
Di-lysine motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 531..534
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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