DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat1 and Agpat2

DIOPT Version :9

Sequence 1:NP_001259494.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001162912.1 Gene:Agpat2 / 34176 FlyBaseID:FBgn0026718 Length:271 Species:Drosophila melanogaster


Alignment Length:267 Identity:96/267 - (35%)
Similarity:158/267 - (59%) Gaps:9/267 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MTSFIELLGL--FLLLMLPFLYETNHIFRYYFKFLMYYGIVSFNSIILIPAFLTRPCDVRNLLWA 66
            |....|::||  .:.|:|....:..:..|.:|.| ...|::.|   :.:|..:.||.|.||.|:.
  Fly     1 MACTCEVIGLACVVALILSATAKAPYQMRMFFIF-FGAGLIVF---LCVPFMILRPRDYRNALFP 61

  Fly    67 STWCHR-VSTLIGLRWELRGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMNKCTVVAKRELFY 130
            | ||.| :..|:|:..|:||.|::.||...:::.||||::|:..:..:|.|:.:.|||:|:|:.|
  Fly    62 S-WCFRQLCRLVGITMEVRGLENVRKDHGAVVIMNHQSAVDLCVLAYLWPVIGRATVVSKKEVLY 125

  Fly   131 AWPFGLAAWLAGLIFIDRVRGEKARETLNDVNRRIKKQRIKLWVFPEGTRRNTGALHPFKKGAFH 195
            ...||:.|||.|.::|||.|...:..:|....:.|:::..||.:||||||.:..:|.|||||:||
  Fly   126 IPFFGIGAWLWGTLYIDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFH 190

  Fly   196 MAIDQQIPILPVVFSSYCTFLNDKKKILNSGRIVITTLPPVSTEGLTKDDIDVLMERVRSQMIET 260
            :|:..:.|:.|||.|.| :|::|:||....|..:|..||.||||...::|:.:|::..:|.|...
  Fly   191 IALQGKSPVQPVVISKY-SFMDDEKKTFRPGHALIHILPEVSTEKYKREDVQLLIDECQSIMQTE 254

  Fly   261 FKVTSAE 267
            :...|.|
  Fly   255 YTKLSKE 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_001259494.1 LPLAT_AGPAT-like 70..254 CDD:153251 72/184 (39%)
Agpat2NP_001162912.1 LPLAT_AGPAT-like 65..248 CDD:153251 71/183 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439672
Domainoid 1 1.000 57 1.000 Domainoid score I4003
eggNOG 1 0.900 - - E1_COG0204
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 61 1.000 Inparanoid score I2541
Isobase 1 0.950 - 0 Normalized mean entropy S1813
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D115461at50557
OrthoFinder 1 1.000 - - FOG0001236
OrthoInspector 1 1.000 - - otm51453
orthoMCL 1 0.900 - - OOG6_100535
Panther 1 1.100 - - P PTHR10434
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X864
1211.750

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