DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat1 and lpcat4

DIOPT Version :9

Sequence 1:NP_001259494.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_991122.2 Gene:lpcat4 / 327566 ZFINID:ZDB-GENE-030131-5777 Length:508 Species:Danio rerio


Alignment Length:301 Identity:68/301 - (22%)
Similarity:118/301 - (39%) Gaps:65/301 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IELLGLFLLLMLPF-------LYETNHI--FRYYFKFLMYYGIVSFNSIILIPAFLTRPCDVRNL 63
            |.|..||.|||.|.       |.|:...  .|.:.::|.::.:|          ||:|       
Zfish    38 ITLAVLFFLLMWPIARLRLAGLPESRRAEPVRGWRRWLFHHVMV----------FLSR------- 85

  Fly    64 LWASTWCHRVSTLIGLRW-ELRGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMNKCTVVAKRE 127
              |..:|      :|..| .::|::...|:...:.||.|.|.||:|    :..|.....||::.|
Zfish    86 --AVFFC------VGFLWVRVKGRQAGLKEAPVLAVAPHSSFLDML----VLSVTGLPIVVSRSE 138

  Fly   128 LFYAWPFGLAAWLAGLIFIDRVRGEKARETLNDVNRRIKKQR--IKLWVFPEGTRRNTGALHPFK 190
            .......|........:.:.|...|..::.::.:..|:....  .::.:|||||..|..||..||
Zfish   139 NAKLPVIGALLEFNQSVLVSRKDPESRKKCVSQICERVTSDGHWPQMLMFPEGTTTNGRALIKFK 203

  Fly   191 KGAFHMAIDQQIPILPVVFSSYCT-----------------FLNDKKKILNSGRIVITTLPPVST 238
            .|||...    :|:.||:. .||:                 ..:...:|.:|  |.:..||..:.
Zfish   204 PGAFVAG----VPVQPVLL-HYCSQPDTVRWTWKGLSWLGALWHTTSQIYSS--ITVEFLPVYTP 261

  Fly   239 EGLTKDDIDVLMERVRSQMIETFKVTSAEALHRYKPIKKVG 279
            ....|.:.::..|.|:..|.....|.:.:.:....|::|:|
Zfish   262 SAEEKQNPELYAENVQKLMARALGVPATDYMMEGFPVQKLG 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_001259494.1 LPLAT_AGPAT-like 70..254 CDD:153251 45/203 (22%)
lpcat4NP_991122.2 PlsC 42..305 CDD:223282 66/297 (22%)
LPLAT_LPCAT1-like 85..291 CDD:153253 50/231 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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