DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat1 and LPCAT

DIOPT Version :10

Sequence 1:NP_572828.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster


Alignment Length:347 Identity:72/347 - (20%)
Similarity:130/347 - (37%) Gaps:104/347 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ITMTSFIELLGLFLL--LMLPFLY---ETNHIFRYYFKFLMYYGIVSFNSIILIP--------AF 53
            |.:.|.||:..:::|  |:||...   ..:.|..:.|..:..|| ::.:.:...|        .:
  Fly    57 IEIDSHIEVAKIYVLTVLLLPIRVVGCVLSLISAWMFACIGLYG-MTLDDLKAKPLTGWRKQMQY 120

  Fly    54 LTRPCDVRNLLWASTWCHRVSTLIGLRWELRGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMN 118
            :| .|.:| :::.....|.|:        ::|:...||:...::||.|.|.:|.:    :.....
  Fly   121 MT-ACGMR-MVYTFGSFHYVT--------MKGRAATAKEAPILVVAPHSSYVDSI----LVVASG 171

  Fly   119 KCTVVAKRE----------LFYAWPFGLAAWLAGLIFIDRVRGEKARETLNDVNRRIKKQRIKLW 173
            ..::|||||          :.||.|          |::.|......:.|:.|:..|.:.  ...|
  Fly   172 PPSIVAKRETADIPLLGKIINYAQP----------IYVQREDPNSRQNTIRDIVDRARS--TDDW 224

  Fly   174 ----VFPEGTRRNTGALHPFKKGAFHMAIDQQIPILPVVF---SSYCTF---------------- 215
                :|.|||..|..||..||.|||:..    :|:.||:.   :.|.||                
  Fly   225 PQVVIFAEGTCTNRTALIKFKPGAFYPG----VPVQPVLLKYPNKYDTFTWTWDGPGVLRLLWLT 285

  Fly   216 ----------------------LNDKKKILNSGRIVITTLPPVSTEGLTKDDIDVLMERVRSQMI 258
                                  :.|.....|:.|.|:.....|.|...:.:|: ::|.|.|...|
  Fly   286 MTQFYNRCEIEYLPVYTPSEDEVADANLYANNVREVMAKALGVPTSDYSFEDV-IVMSRARDMKI 349

  Fly   259 ETFKVTSAEALHRYKPIKKVGI 280
            .    ...:.:...:.|:|:|:
  Fly   350 P----FPGDIVEIERTIEKLGL 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_572828.1 PlsC 65..259 CDD:439974 52/248 (21%)
LPCATNP_001036265.1 LPLAT_LPCAT1-like 126..338 CDD:153253 49/240 (20%)
FRQ1 401..>505 CDD:444056
EF-hand_8 455..507 CDD:404678
Blue background indicates that the domain is not in the aligned region.

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